Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi16g855 | ATGTCTGACGGTCTCGCTGTGCTACATGCTCTTGATTCAGCTCGAACACAATGGTACCACATCACCGCCATCGTCATCGCCGGCATGGGCTTCTTCACTGATGCCTATGATCTCTTCTGCATCTCCACCGTCTCCAAACTCCTCGGCCGCCTTTACTACTATGACCCCACTAAAGATAAGCCTGGGAAGCTCCCCCACGGTGTTAACAACTTTGTGATTGGGGTTGCCCTAGTAGGAACCCTATCAGGCCAACTAGTATTTGGTTGGCTTGGTGACAAACTTGGCCGGAAAAAAGTTTATGGCATGACTCTCATTCTTATATTCTGGCTAGGGTTTGGAATTGGAGGTGACTATCCTCTCTCCGCAACGATCATGTCGGAGTATGCAAATAAAAAAACTCGTGGGGCTTTTATTGCAGCCGTGTTTGCTATGCAGGGCGTGGGGATCACTGTGCCATTCAGTGAGGAACCTATACTTTCTACACAACCTGAGGCAGATTATCTATGGCGGATCGTGCTGATGCTTGGAGCCTTGCCTGCGCTTTTAACATACTATTGGAGAATGAAGATGCCGGAGACCGGTCGGTACACTGCCCTTATTGAAGGAAATGCTAAACAAGCTGCTGCAGACATGGGTAGGGTTCTTGAGATTGAAATCCAAGCTGAAGCAGATAAAGTGGCAGACCAAAACCTAACTCAGAAGGATATTTTTCCGGCGATGAACCTGGTAAAGAAAGATTATGAAGTCAGTGCTCTCCGGGAAATGTTCGAGACATCCAGGGCCATGTTTGTGGTGGCCTTGCTGGGGACTTTTCCGGGATACTGGTTCACAGTTTTCTTCATTGACCGGATTGGCCGATTCATCATCCAGCTTGTGGGGTTCTTCATGATGTCCTTATTCATGCTGATAATAGGAATCAAGTACGAATACCTCAGGGACGATAATAAATGGCTGTTTGCAGTCCTATATGGGCTGACCTTCTTCTTCGCCAATTTCGGTCCAAACAGCACAACTTTTGTTCTTCCGGCCGAGCTGTTCCCGACCCGAGTGAGATCAACATGCCATGCAATGAGCGCTGCGGCCGGGAAGGCTGGGGCTATGATCGGGGCATTTGTGGTGGCGACCTATACTTTGGATGGTAAAGCTAATGAAATTAGGATAGCCATGATAACCATGGCCTGTACAAACATGCTAGGGTTCTTCTGCACATTCTTGGTGACGGAGACCAAAGGCCGATCCCTCGAGGAAATATCAGGCGAGGATGGAGGTATTAATGAAACCGAGATGGCTAGCAGACCATCTTAA | 1305 | 48.35 | MSDGLAVLHALDSARTQWYHITAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYYDPTKDKPGKLPHGVNNFVIGVALVGTLSGQLVFGWLGDKLGRKKVYGMTLILIFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGVGITVPFSEEPILSTQPEADYLWRIVLMLGALPALLTYYWRMKMPETGRYTALIEGNAKQAAADMGRVLEIEIQAEADKVADQNLTQKDIFPAMNLVKKDYEVSALREMFETSRAMFVVALLGTFPGYWFTVFFIDRIGRFIIQLVGFFMMSLFMLIIGIKYEYLRDDNKWLFAVLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHAMSAAAGKAGAMIGAFVVATYTLDGKANEIRIAMITMACTNMLGFFCTFLVTETKGRSLEEISGEDGGINETEMASRPS* | 435 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 19309224 | 19310778 | + | Vvi16g855 | Vvi16g855 | 778504 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi16g855 | 434 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 1 | 411 | IPR020846 | GO:0022857 | |
Vvi16g855 | 434 | CDD | MFS_PhT | 24 | 410 | - | - | |
Vvi16g855 | 434 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 229 | 425 | - | - | |
Vvi16g855 | 434 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 4 | 107 | - | - | |
Vvi16g855 | 434 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 108 | 227 | - | - | |
Vvi16g855 | 434 | Pfam | Sugar (and other) transporter | 110 | 213 | IPR005828 | GO:0016021|GO:0022857|GO:0055085 | |
Vvi16g855 | 434 | Pfam | Sugar (and other) transporter | 24 | 107 | IPR005828 | GO:0016021|GO:0022857|GO:0055085 | |
Vvi16g855 | 434 | Pfam | Sugar (and other) transporter | 256 | 418 | IPR005828 | GO:0016021|GO:0022857|GO:0055085 | |
Vvi16g855 | 434 | Gene3D | MFS general substrate transporter like domains | 19 | 432 | IPR036259 | - | |
Vvi16g855 | 434 | SUPERFAMILY | MFS general substrate transporter | 11 | 418 | IPR036259 | - | |
Vvi16g855 | 434 | PANTHER | INORGANIC PHOSPHATE TRANSPORTER 1-11 | 108 | 227 | - | - | |
Vvi16g855 | 434 | PANTHER | INORGANIC PHOSPHATE TRANSPORTER 1-11 | 229 | 425 | - | - | |
Vvi16g855 | 434 | PANTHER | INORGANIC PHOSPHATE TRANSPORTER 1-11 | 4 | 107 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi16g855 | K08176 | - | vvi:100253597 | 808.135 |