Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g855 ATGTCTGACGGTCTCGCTGTGCTACATGCTCTTGATTCAGCTCGAACACAATGGTACCACATCACCGCCATCGTCATCGCCGGCATGGGCTTCTTCACTGATGCCTATGATCTCTTCTGCATCTCCACCGTCTCCAAACTCCTCGGCCGCCTTTACTACTATGACCCCACTAAAGATAAGCCTGGGAAGCTCCCCCACGGTGTTAACAACTTTGTGATTGGGGTTGCCCTAGTAGGAACCCTATCAGGCCAACTAGTATTTGGTTGGCTTGGTGACAAACTTGGCCGGAAAAAAGTTTATGGCATGACTCTCATTCTTATATTCTGGCTAGGGTTTGGAATTGGAGGTGACTATCCTCTCTCCGCAACGATCATGTCGGAGTATGCAAATAAAAAAACTCGTGGGGCTTTTATTGCAGCCGTGTTTGCTATGCAGGGCGTGGGGATCACTGTGCCATTCAGTGAGGAACCTATACTTTCTACACAACCTGAGGCAGATTATCTATGGCGGATCGTGCTGATGCTTGGAGCCTTGCCTGCGCTTTTAACATACTATTGGAGAATGAAGATGCCGGAGACCGGTCGGTACACTGCCCTTATTGAAGGAAATGCTAAACAAGCTGCTGCAGACATGGGTAGGGTTCTTGAGATTGAAATCCAAGCTGAAGCAGATAAAGTGGCAGACCAAAACCTAACTCAGAAGGATATTTTTCCGGCGATGAACCTGGTAAAGAAAGATTATGAAGTCAGTGCTCTCCGGGAAATGTTCGAGACATCCAGGGCCATGTTTGTGGTGGCCTTGCTGGGGACTTTTCCGGGATACTGGTTCACAGTTTTCTTCATTGACCGGATTGGCCGATTCATCATCCAGCTTGTGGGGTTCTTCATGATGTCCTTATTCATGCTGATAATAGGAATCAAGTACGAATACCTCAGGGACGATAATAAATGGCTGTTTGCAGTCCTATATGGGCTGACCTTCTTCTTCGCCAATTTCGGTCCAAACAGCACAACTTTTGTTCTTCCGGCCGAGCTGTTCCCGACCCGAGTGAGATCAACATGCCATGCAATGAGCGCTGCGGCCGGGAAGGCTGGGGCTATGATCGGGGCATTTGTGGTGGCGACCTATACTTTGGATGGTAAAGCTAATGAAATTAGGATAGCCATGATAACCATGGCCTGTACAAACATGCTAGGGTTCTTCTGCACATTCTTGGTGACGGAGACCAAAGGCCGATCCCTCGAGGAAATATCAGGCGAGGATGGAGGTATTAATGAAACCGAGATGGCTAGCAGACCATCTTAA 1305 48.35 MSDGLAVLHALDSARTQWYHITAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYYDPTKDKPGKLPHGVNNFVIGVALVGTLSGQLVFGWLGDKLGRKKVYGMTLILIFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGVGITVPFSEEPILSTQPEADYLWRIVLMLGALPALLTYYWRMKMPETGRYTALIEGNAKQAAADMGRVLEIEIQAEADKVADQNLTQKDIFPAMNLVKKDYEVSALREMFETSRAMFVVALLGTFPGYWFTVFFIDRIGRFIIQLVGFFMMSLFMLIIGIKYEYLRDDNKWLFAVLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHAMSAAAGKAGAMIGAFVVATYTLDGKANEIRIAMITMACTNMLGFFCTFLVTETKGRSLEEISGEDGGINETEMASRPS* 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 19309224 19310778 + Vvi16g855 Vvi16g855 778504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g855 434 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 411 IPR020846 GO:0022857
Vvi16g855 434 CDD MFS_PhT 24 410 - -
Vvi16g855 434 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 229 425 - -
Vvi16g855 434 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 4 107 - -
Vvi16g855 434 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 108 227 - -
Vvi16g855 434 Pfam Sugar (and other) transporter 110 213 IPR005828 GO:0016021|GO:0022857|GO:0055085
Vvi16g855 434 Pfam Sugar (and other) transporter 24 107 IPR005828 GO:0016021|GO:0022857|GO:0055085
Vvi16g855 434 Pfam Sugar (and other) transporter 256 418 IPR005828 GO:0016021|GO:0022857|GO:0055085
Vvi16g855 434 Gene3D MFS general substrate transporter like domains 19 432 IPR036259 -
Vvi16g855 434 SUPERFAMILY MFS general substrate transporter 11 418 IPR036259 -
Vvi16g855 434 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-11 108 227 - -
Vvi16g855 434 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-11 229 425 - -
Vvi16g855 434 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-11 4 107 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g855 K08176 - vvi:100253597 808.135