Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi16g952 | ATGGAGATGGTGCTACCTCTAGTTTTGGTATTAGTATTTTCCCTGACCTCTCAGATTGAAGCTGAGCTTCAAGTGGGATTCTACAGAGACAAATGCAGAGCTGAATCAATTGTGAAGGACGAAGTTGAAAAGGCCTTCGACAGAGACAGGGGAATTGCTCCTGGTCTGTTGAGACTGCATTTTCATGATTGCTTTGTTAGGGGATGTGATGCATCCATCCTTGTAGACTCAACCCCAATGAATGTAGGCGAGAAGGATGGTCCACCCAATGTCAATACTCTCCGTGGGACCGAAGTGATCGACAGTGCCAAGGCTAGACTAGAAGCTGAATGTAAAGGAGTAGTCTCTTGTGCAGATACTCTTGCATTTGCAGCAAGAGATGCTGTAGAAATAAGCAACGGCTTTGGGTGGTCAGTTCCAGCAGGGAGGCGAGATGGAAGGGTGTCACTTGCTTCTGAGACTCTAGACATACCTGCTCCATTTCTTAACCTTGATCAACTCACCCAGTCCTTTGCTAAGAAGGGACTAACACAGGAAGAGATGGTCACGCTCTCCGGCGCTCACACAATTGGCCATGCTCATTGCACCTCATTCAGCAACAGACTATATGACTTCAATGCATCGTCTAGCCAAGACCCGAGTTTAAACCCCCTATATGCTGAGGATTTGAAGAGACAATGCCCAAGAGGTCCACAGGGAACTGTTGATCCTAACCTCGTTGTGGACATGAACTTCAGCCCAGCTGTGATGGACTCGAGCTATTACACAGATGTTCTTCATCACCGTGGCCTGTTCACGTCTGATCAGGCACTCACAACCAGCCAGGCTACTGCCAGGCAAGTGACCACATATGCAGTAAATAGGTTGCTTTGGGAGTCGGAGTTTGCTAAAGCAATGGTGAAGATGAGTCAAATTGAAGTACTAACAGGAACTGATGGAGAGATTCGAACCAACTGGAACCAATCATATCCATTTAAGATGGTTCTGACTTCTACTATAAATACCTATAACAATGTTATAGCCTATAAGCACAAAGAAGTAATGAGTTCGAAAAGGGTTACTTGGTTGTCTTTAACTTGGGTTCTGGTTTTCTTATGTCTAAGTGTTGAGTTGGAAGCTCAGCTTCAAGTGGGGTTCTATAGAACCTCATGTGGCTTGGCTGAATTCATAGTGAAAGATGAGGTTAGGAAAGGGTTCATTCGGGACAGTGGGGTGGCTCCTGGCCTGGTCAGAATGCACTTTCATGATTGTTTTGTTAGGGGTTGCGATGGGTCAGTGCTCATCGATTCGACTCCCTCAAACACAGCAGAAAAGGATTCTCCTGCTAACAACCCTAGTCTTAGAGGGTTTGAAGTCATTGATAGTGCAAAGGCTAGACTCGAAGCTGTGTGCAAGGGAGTGGTTTCATGTGCTGATATAGTTGCCTTTGCAGCAAGGGATAGCGTGGAGATAACCGGAGGGCTTGGCTATGATGTCCCTGCAGGAAGAAGAGATGGCAGAATTTCACTAGCTTCAGAGGCATCGACAAACTTACCACCCCCGACCTTTACTGTCGACCAACTCACTCAGTTCTTTTCAAACAAAGGATTGACACAGGATGAAATGGTGACTCTCAGTGGAGCACACACAATTGGCCGTTCGCATTGCAGTTCCTTCAGCAACAGGTTGTACAATTTCAATGGAACATCGGGCCAGGACCCTACTCTAGATCCCCAGTATACGTAG | 1725 | 46.43 | MEMVLPLVLVLVFSLTSQIEAELQVGFYRDKCRAESIVKDEVEKAFDRDRGIAPGLLRLHFHDCFVRGCDASILVDSTPMNVGEKDGPPNVNTLRGTEVIDSAKARLEAECKGVVSCADTLAFAARDAVEISNGFGWSVPAGRRDGRVSLASETLDIPAPFLNLDQLTQSFAKKGLTQEEMVTLSGAHTIGHAHCTSFSNRLYDFNASSSQDPSLNPLYAEDLKRQCPRGPQGTVDPNLVVDMNFSPAVMDSSYYTDVLHHRGLFTSDQALTTSQATARQVTTYAVNRLLWESEFAKAMVKMSQIEVLTGTDGEIRTNWNQSYPFKMVLTSTINTYNNVIAYKHKEVMSSKRVTWLSLTWVLVFLCLSVELEAQLQVGFYRTSCGLAEFIVKDEVRKGFIRDSGVAPGLVRMHFHDCFVRGCDGSVLIDSTPSNTAEKDSPANNPSLRGFEVIDSAKARLEAVCKGVVSCADIVAFAARDSVEITGGLGYDVPAGRRDGRISLASEASTNLPPPTFTVDQLTQFFSNKGLTQDEMVTLSGAHTIGRSHCSSFSNRLYNFNGTSGQDPTLDPQYT* | 575 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 21152034 | 21155500 | + | Vvi16g952 | Vvi16g952 | 778601 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi16g952 | 574 | PRINTS | Haem peroxidase superfamily signature | 53 | 67 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi16g952 | 574 | PRINTS | Haem peroxidase superfamily signature | 115 | 132 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi16g952 | 574 | PRINTS | Haem peroxidase superfamily signature | 133 | 145 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi16g952 | 574 | PRINTS | Haem peroxidase superfamily signature | 180 | 195 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi16g952 | 574 | PRINTS | Haem peroxidase superfamily signature | 243 | 258 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi16g952 | 574 | Gene3D | Peroxidase, domain 2 | 523 | 574 | - | - | |
Vvi16g952 | 574 | ProSiteProfiles | Plant heme peroxidase family profile. | 22 | 318 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi16g952 | 574 | CDD | secretory_peroxidase | 374 | 573 | IPR033905 | GO:0004601|GO:0042744 | |
Vvi16g952 | 574 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 534 | 544 | IPR019793 | - | |
Vvi16g952 | 574 | ProSitePatterns | Peroxidases active site signature. | 406 | 417 | IPR019794 | GO:0004601 | |
Vvi16g952 | 574 | Pfam | Peroxidase | 391 | 573 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi16g952 | 574 | Pfam | Peroxidase | 38 | 286 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi16g952 | 574 | SUPERFAMILY | Heme-dependent peroxidases | 23 | 321 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi16g952 | 574 | ProSiteProfiles | Plant heme peroxidase family profile. | 374 | 574 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi16g952 | 574 | PANTHER | PEROXIDASE | 360 | 573 | - | - | |
Vvi16g952 | 574 | PANTHER | PEROXIDASE | 9 | 318 | - | - | |
Vvi16g952 | 574 | Gene3D | - | 26 | 318 | - | - | |
Vvi16g952 | 574 | PRINTS | Plant peroxidase signature | 55 | 75 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi16g952 | 574 | PRINTS | Plant peroxidase signature | 95 | 108 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi16g952 | 574 | PRINTS | Plant peroxidase signature | 114 | 124 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi16g952 | 574 | PRINTS | Plant peroxidase signature | 133 | 148 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi16g952 | 574 | PRINTS | Plant peroxidase signature | 179 | 191 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi16g952 | 574 | PRINTS | Plant peroxidase signature | 257 | 274 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi16g952 | 574 | PRINTS | Plant peroxidase signature | 297 | 310 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi16g952 | 574 | SUPERFAMILY | Heme-dependent peroxidases | 374 | 573 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi16g952 | 574 | CDD | secretory_peroxidase | 22 | 318 | IPR033905 | GO:0004601|GO:0042744 | |
Vvi16g952 | 574 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 180 | 190 | IPR019793 | - | |
Vvi16g952 | 574 | Gene3D | Peroxidase, domain 2 | 158 | 302 | - | - | |
Vvi16g952 | 574 | Gene3D | - | 375 | 522 | - | - | |
Vvi16g952 | 574 | ProSitePatterns | Peroxidases active site signature. | 53 | 64 | IPR019794 | GO:0004601 | |
Vvi16g952 | 574 | PANTHER | PEROXIDASE 25-RELATED | 360 | 573 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi16g952 | 574 | PANTHER | PEROXIDASE 25-RELATED | 9 | 318 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi16g952 | K00430 | - | vvi:100853331 | 622.468 |