Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g955 ATGAATCAGGACAAGGTCCTCATGGAGAGCTGGTACTATTTGAAAGATGCAGTTCTTGATGGTGGAATCCCCTTCAACAAAGCCTATGGAATGACTGCCTTTGAGTATCATGGCACAGATCCTAGATTCAACAAGGTGTTCAACAATGGAATGTCTGGTCATTCCACCATTACCATGAAGAAAATTCTTGAAGCCTACAAGGGTTTTGAGGGCCTCACCTCAATTGTTGATGTTGGTGGTGGGACTGGAGCCACCCTTAACATGATCATATCCAAATACCCCACTATTAAGGGCATTAACTTTGACTTGCCTCATGTTATTGATGATGCCCCATCTTATCCTGGTGTGGAGAATGTTGGGGGAGACATGTTTGTGAGTGTCCCAAAGGGAGATGCCATCTTCATGAAGTGGATATGCCATGATTGGAGTGATGCTCATTGCTTGAAGTTCTTGAAGAACTGTTATCAGGCACTTCCAGACAATGGGAAGAGAGGACCGAGAAAGAATTCGAAGCCTTGGCCAAGGGAGCTGGATTCCAAGGCTTCAAGGTAG 552 45.11 MNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNNGMSGHSTITMKKILEAYKGFEGLTSIVDVGGGTGATLNMIISKYPTIKGINFDLPHVIDDAPSYPGVENVGGDMFVSVPKGDAIFMKWICHDWSDAHCLKFLKNCYQALPDNGKRGPRKNSKPWPRELDSKASR* 184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 21165377 21168368 + Vvi16g955 Vvi16g955 778604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g955 183 PANTHER BNAA10G07250D PROTEIN 1 163 - -
Vvi16g955 183 Pfam O-methyltransferase domain 11 163 IPR001077 GO:0008171
Vvi16g955 183 CDD AdoMet_MTases 75 163 - -
Vvi16g955 183 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 183 IPR016461 GO:0008168
Vvi16g955 183 MobiDBLite consensus disorder prediction 161 183 - -
Vvi16g955 183 PANTHER O-METHYLTRANSFERASE 1 163 IPR016461 GO:0008168
Vvi16g955 183 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 163 IPR029063 -
Vvi16g955 183 MobiDBLite consensus disorder prediction 164 183 - -
Vvi16g955 183 Gene3D Vaccinia Virus protein VP39 1 164 IPR029063 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi15g605 Vvi16g955 ECH
Vvi2g271 Vvi16g955 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g955 K13066 - vvi:100854172 348.977