Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g956 ATGAATCAGGACAAGGTCCCCATGCAGAGCTGGTACCATTTGAAAGATGCAGTTCTTGATGGTGGAATCCCCTTCAACAAGGCCTATGGAATGACTGACTTTGAGTATCATGGCACAGAACCTAGATTCAACAAGGTATTCAACAATGGAGTGTCTGGTCATCCCACCATTACCATGAAGAAAATTCTTGAAGCCTACAAGGGTTTTGAGGGCCTCACCTCAATTGTTGATGTTGGTGGTGGGACTGGAGCCACCCTTAACATGATCATATCCAAATACCCCACTATTAAGGGCATTAACTTTGACTTGCCTCATGTTATTGATGATGCCCCATCTTATCCTGGTGTGGAGCATGTTGGGGGAGACATGTTTGTGAGTGTCCCAAAGGGAGATGCCATCTTCATGAAGTGGATGTGCTATGAGTGGGATGATGCTCATTGCTTGAAGTTCTTGGAGAATTGTTATCAGGCACTTCCAGACAATGGAAAGGTAATTGTTGCTGAGTGCATCCTTCCTGTGGTCCCAGACACCAGCCTAGCCACCAAGACTGCCGTCCATATTGACGTTATTATGTTGGCTTATAACACTGGTGGAAAAGCGAGGACAGAGAAAGAGTTCGAAGCCTTAGCCAAGGGAGCTGGATTCCAAGGTTTCAAGGTAGTGTGTTGTGCCTTCAACAGTTGGATCATGGAATTTTGTAAAACTGCTTGA 711 45.43 MNQDKVPMQSWYHLKDAVLDGGIPFNKAYGMTDFEYHGTEPRFNKVFNNGVSGHPTITMKKILEAYKGFEGLTSIVDVGGGTGATLNMIISKYPTIKGINFDLPHVIDDAPSYPGVEHVGGDMFVSVPKGDAIFMKWMCYEWDDAHCLKFLENCYQALPDNGKVIVAECILPVVPDTSLATKTAVHIDVIMLAYNTGGKARTEKEFEALAKGAGFQGFKVVCCAFNSWIMEFCKTA* 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 21175294 21178118 + Vvi16g956 Vvi16g956 778605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g956 236 Gene3D Vaccinia Virus protein VP39 1 234 IPR029063 -
Vvi16g956 236 CDD AdoMet_MTases 75 166 - -
Vvi16g956 236 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 234 IPR016461 GO:0008168
Vvi16g956 236 PANTHER BNAA10G07250D PROTEIN 1 235 - -
Vvi16g956 236 Pfam O-methyltransferase domain 11 216 IPR001077 GO:0008171
Vvi16g956 236 PANTHER O-METHYLTRANSFERASE 1 235 IPR016461 GO:0008168
Vvi16g956 236 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 232 IPR029063 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi2g270 Vvi16g956 ECH
Vvi15g606 Vvi16g956 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g956 K13066 - vvi:100232862 488.034