Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g965 ATGGTGTGTTGTTTCTTGGATTTCCAGGAAACTAGAGACTCTCCTATGAAAACGCAAAATCCACTAATTGATCGATGTAAGGGAGAAGATCAGAACGAAGAGTACAACAGAAGGGGAACTGAGATGGTAATTTGTATACAAATGCATAGTAATTACATAATGATCCTTCTCGTCTCAGTAAGTTGGGCACCAGATGGTGCATCTCATCTTTACAAAAATCATCATCTCGACAAAAAAACATCTTCTTTCATCTTGATTCTAAACGAGAAAGTTAGCTCGGTATCTCCTGCACAACCTAAAAGCAAGGTCCACATTGTTTATTTGGGAAAGAGGCAGCACCATGATCCAGAACTCATCACCAACATTCATCATGAAATGCTAACTACAGTTCTTGGAAGCAAAGAAGCATCTGTAGATTCCATGATCTACAGTTACAGACATGGCTTCTCTGGATTTGCAGCCAAGTTGACAGAAGCTCAAGCACAAGCAGTTTCAGAGTTACCTGGTGTGGTTCAAGTCATGTCCTCTCGCCTTCATAAGCTGAAGACAACAAGGAGCTGGGATTACCTTGGCCTCTCCTCTTCACATTCTTCCACCAATCTCCTGTATGAAACCAACAACGGTGATGGAATCATCATTGGCCTTCTTGACACAGGGATATGGCCCGAATCAGAAGTTTTCAGCGATAAAGGTCTGGGGCCAATCCCGTCTAGATGGAAAGGTGGCTGCAGCTCAGGACAGAGCTTCAATGCAACAAAGCACTGCAACAGAAAACTTATTGGAGCTCGTTATTTCTTCAAGGGACTTGAAGCAGAGATTGGAGAGCCATTGAATACCACTGAATACCTAGAATACCTGTCCCCGAGAGACGCACTTGGACATGGTACACATACATCTTCTATTGCTGGTGGTTCTCCTGTGGTCAATGCCAGCTACTATGGGCTTGGTTTTGGAACAGTGAGGGGTGGCGCACCTGGGGCTCGGCTGGCCATGTATAAAGTGTGCTGGAATTTGGAGGGGGGATTCTGCTCAGATGCTGATATACTGAAAGCTTTTGACAAAGCCATCCACGACGGAGTAGATGTGTTATCAGTCTCACTCGGTTCCGACGACATCCCGTTCACTGAAATTATCAAACCTGATAGCATCCTCATTGGTTCATTCCATGCTGTGGCACAGGGGATTTCAGTTGTTTGTGCAGCAGGAAATGGAGGCCCAAGTGCTCAAACAGTAGAGAATACAGCACCGTGGATATTAACTGTAGCAGCTAGCAGCATTGATCGGTCCTTCCCTACACCCATCACACTAGGCAACAACCGCACCGTCATGGGTCAAGCCATGCTCATTGGAAACCTTACAGGCTTCGCTAGCTTAGTGTACCCAGATGACCCACATCTCCAGAGTCCTAGCAGTTGTCTATATATGTCACCGAATGACACTTCAGTGGCTGGAAAAGTGGCGCTCTGCTTCACTTCAGGTACATTTGAGACACAATTTGCTGCATCTTTCGTGAAAGAAGCTCGTGGCCTGGGGGTAATTATTGCTGAGAATTCTGGAAACACCCAGGCGTCATGCATCAGTGACTTCCCATGTATTAAAGTAAGCTACGAAACTGGAAGCCAGATACTCTACTACATCAGTTCGACCAGGCATCCCCATGTAAGGCTGAGCCCTTCTAAAACACATGTTGGGAAACCCGTGCCAACCAATGTGGCCTACTTCTCATCTCGAGGGCCAAGTTTCCCTAGTCCAGCAGTATTGAAGCCAGATATAGCAGGTCCAGGTGCCCAAATACTTGGGGCAGTTCTACCTTCTGATCTGAAAAAGAACACCGAATTTGCTTTCCATTCTGGAACATCCATGGCAACTCCTCACATTGCAGGCATTGTTGCACTACTCAAATCCCTGCACCCACATTGGTCCCCAGCTGCAATTAAATCAGCAATTGTCACAACAGGATGGACAACCGATCCGTCTGGAGAACCAATCTTTGCCGAGGGAGATCCAACAAAGCTTGCTGATCCATTTGATTTTGGAGGTGGAATTGTGAATCCGAATAGAGCAGCGGATCCTGGTCTAGTGTATGACATGGGTACAGCGGATTATATTCATTATCTCTGTACCTTGGGCTACAACAACTCTGCCATTTTTCAGTTCACAGAACAATCCATACGCTGCCCCACTCGAGAGCATTCTATTCTTGACTTGAATCTTCCTTCCATAACCATCCCAAGCCTCCAAAATTCAACCTCTCTCACCAGAAACGTCACAAATGTTGGAGCTGTCAACTCCACATACAAAGCCTCTATCATATCCCCAGCAGGCATAACCATAACAGTAAAACCTGATACTTTGATTTTCAACTCCACCATCAAAACTGTTACCTTCAGTGTCACAGTTTCCTCAATTCACCAGGTGAACACAGAATACTCTTTTGGGAGCTTGACTTGGGTTGATGGGGTGCATGCAGTGAAAAGTCCCATATCTGTGAGAACTATGATCGAAGAATCTTATGCTAATGACAGCTAA 2529 45.55 MVCCFLDFQETRDSPMKTQNPLIDRCKGEDQNEEYNRRGTEMVICIQMHSNYIMILLVSVSWAPDGASHLYKNHHLDKKTSSFILILNEKVSSVSPAQPKSKVHIVYLGKRQHHDPELITNIHHEMLTTVLGSKEASVDSMIYSYRHGFSGFAAKLTEAQAQAVSELPGVVQVMSSRLHKLKTTRSWDYLGLSSSHSSTNLLYETNNGDGIIIGLLDTGIWPESEVFSDKGLGPIPSRWKGGCSSGQSFNATKHCNRKLIGARYFFKGLEAEIGEPLNTTEYLEYLSPRDALGHGTHTSSIAGGSPVVNASYYGLGFGTVRGGAPGARLAMYKVCWNLEGGFCSDADILKAFDKAIHDGVDVLSVSLGSDDIPFTEIIKPDSILIGSFHAVAQGISVVCAAGNGGPSAQTVENTAPWILTVAASSIDRSFPTPITLGNNRTVMGQAMLIGNLTGFASLVYPDDPHLQSPSSCLYMSPNDTSVAGKVALCFTSGTFETQFAASFVKEARGLGVIIAENSGNTQASCISDFPCIKVSYETGSQILYYISSTRHPHVRLSPSKTHVGKPVPTNVAYFSSRGPSFPSPAVLKPDIAGPGAQILGAVLPSDLKKNTEFAFHSGTSMATPHIAGIVALLKSLHPHWSPAAIKSAIVTTGWTTDPSGEPIFAEGDPTKLADPFDFGGGIVNPNRAADPGLVYDMGTADYIHYLCTLGYNNSAIFQFTEQSIRCPTREHSILDLNLPSITIPSLQNSTSLTRNVTNVGAVNSTYKASIISPAGITITVKPDTLIFNSTIKTVTFSVTVSSIHQVNTEYSFGSLTWVDGVHAVKSPISVRTMIEESYANDS* 843
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 21257360 21269242 - Vvi16g965 Vvi16g965 778614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g965 842 ProSitePatterns Serine proteases, subtilase family, serine active site. 618 628 IPR023828 -
Vvi16g965 842 ProSiteProfiles Serine proteases, subtilase domain profile. 186 689 - -
Vvi16g965 842 Pfam Fibronectin type-III domain 735 830 IPR041469 -
Vvi16g965 842 PANTHER PEPTIDASE S8 80 841 - -
Vvi16g965 842 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.1-RELATED 80 841 - -
Vvi16g965 842 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 88 182 IPR037045 -
Vvi16g965 842 Pfam Subtilase family 208 653 IPR000209 GO:0006508|GO:0008236
Vvi16g965 842 Pfam Peptidase inhibitor I9 103 177 IPR010259 -
Vvi16g965 842 SUPERFAMILY Subtilisin-like 182 693 IPR036852 GO:0004252|GO:0006508
Vvi16g965 842 PRINTS Subtilisin serine protease family (S8) signature 208 227 IPR015500 -
Vvi16g965 842 PRINTS Subtilisin serine protease family (S8) signature 290 303 IPR015500 -
Vvi16g965 842 PRINTS Subtilisin serine protease family (S8) signature 617 633 IPR015500 -
Vvi16g965 842 Gene3D - 706 834 - -
Vvi16g965 842 Gene3D Peptidase S8/S53 domain 210 702 IPR036852 GO:0004252|GO:0006508
Vvi16g965 842 CDD PA_subtilisin_like 434 552 - -
Vvi16g965 842 Gene3D - 427 563 - -
Vvi16g965 842 CDD Peptidases_S8_3 179 654 IPR034197 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi2g267 Vvi16g965 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g965 - - vvi:100264034 1454.5