Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g966 ATGGCCGCTCTACTCTCTTTGCTTCCGAATCCATTCTCTTCTTCTTCTTCTTCATCTTCTCCGTCGCTCCCTTCGGTACCCATCAATACTCCGGCAACACCTCAGTTCTCAGTTGCTTTATCTGCAACTAGTCATCTTCATAATTGGGTTTCTGTGATCAATGCTAGTATAACCAGAACCAGTCAACTGAAGACGCTGTTGCTGCCCAAATGCTTCGCCATTAACAGCACCATCTCCTCCTCCGATGTCTTCAATGACACGGGATCACTCTTCTCGCTCTTCCAAGGACTTGGAGTCGATGAAAGGGAGGTGGAATTACTTTTAAACAAGAACCCGGCTCTCCGGCTTGCGTCTTTTGATTGTGTACATGAACGGGTTTGTTCTTTAGAGTCACTTGGAATCAATGGGGTTGCGCTGTATAGCTTGATTACCAAATGTCCAGATGTGTTAACTGCTCCTGAAATTGATCCATTAATTAGTTTCATTCGGGACGATTTAGAGGGGAAGATAGAGCCCGCCCAGATTTGCCGTCTTTTGAAGGCCGCAGAACCAAGATTCTTGGTGGGTTTTGATGGGAAGGTTAGACTGCTCGTTCATCATGGAATCCCCCAGGAGAGGATTGCTCATGTTCTCAACAATGTTAATTTAACCAGGGCAATATGCCTTAAGTCAGCTGAAGAAATTGAAAAAACATTCACCTTCTTGAGTCGTTTTGGCGCTGTTGATATAATCATTAAGCGCCCGGCAATTCTCAATTATGACTTGGAGAGTCAACTGATTCCTAGGGTTAGGGTTCTTGTAGAGCTCAGTGGGGGAGATGATGCTGCCACAGGAGTGGTTTTGCGTAAGCTCCCGGCAATTTTGAGATATAGTGAGGAGCATTTGGGTGGTCATGTGGAGTTCTTGAGGTCATTTGCCGGTCTTAGTGACCAGGAAATTTTCAAGATTGTATGTGTGTTCCCTAATGTTTTCAGTGCAAGCAAGGAGAGGAAATTGAATCCCAGGATTGATTTTCTCAAGCAATGTGGGTTGAATTCCTATGATATCTTCAGGTTCTTGATAAAAGCGCCTCTGTTTCTAGGGTTGTCCTTTGAAGAGAACCTCGTGCACAAACTCAGTTTATTGGTGAAGATCGGATATCAATATAGGACAAGGGAATTGGCCATCGCCATGGGAGCTGTGACAAGAACAAGCTGCGAGAATTTACAGAAGGTGATTGGGCTATTTTTGAGTTATGGATTATCTTGTGAGGACATTGTTGCCATGAGCAATAAGCATCCCCAGATACTACAATACAATCCCACTTCTTTGAAGGAGAAGATTGAATACTTGATTGAGGACATGGGTCGTGAAGTTGATGAGCTGTTGGCTTTTCCTGCGTTTCTCGGTTACAAACTTGATGACAGAATCAAGCATAGGTATGAAGTAAAGAAGAAGATTATAGGAGAAGGAATGTCTCTCAACAAGCTTTTGAGTGTTTATATAGTCTATATGGGAGAAAGGCAACATGGCAACCTAGATCTTATAACGGATGGTCATCACAGAATGCTCTCTGAAGTCCTTGGAAGCGATGAAGCATCAGTTGAATCCATGGTCTACAGCTATAAACATGGCTTCTCTGGGTTCGCAGCCAAACTGACGGAGGCTCAAGCGCAAATGTTTGCAGAGTTACCAGATGTTGTTCAAGTCATACCCAATCGTTTACATAAGCTGCAAACAACGAGAAGCTGGGATTATCTTGGACTCCCTTTGGATTCACCAACCAGTCTTCTGCATGAAACCAAGATGGGTGATGGCACCATCATTGGCCTTCTTGATACGGGAATATGGCCAGAATCAGAAGTTTTCATGAGGGGTGGTGCACCCCGGGCCAGGCTGGCAATGTACAAAGTGTGCTGGAATTTATATGGTGGTGTATGTGCAGATGCTGATATATTCAAGGGCATTGATGAAGCCATACATGATGGGGTTGATGTATTATCACTGTCCATCAGCTCAGATATTCCCTTGTTTTCCCATGTTGACCAGCATGATGGGATTTCCATAGCTTCATTCCATGCTGTGGTGAGGGGGATCCCTGTTGTTAGTGCAGCAGGTAATAGCGGTCCAAGTGCTGAAACAGTATCAAACACAGCACCATGGATTATAACTGTTGCAGCTAGCACCATGGATAGATTGTTTGCCACCCATATAACACTTGGAAACAACCAGACCATAACAGGTGAAGCTGTGTATTTAGGTAAGGATACAGGGTTCACCAACTTGGCGTATCCAGAAGTCTCAGACCTCCTAGCTCCACGCTATTGTGAATCTCTCTTGCCAAACGACACTTTTGCAGCTGGAAATGTGGTGCTTTGCTTCACTTCAGATTCCAGTCACATTGCTGCAGAGTCTGTCAAAAAGGCTGGTGGTCTGGGGGTGATTGTTGCCAGTAACGTAAAAAATGACCTGAGTTCATGCAGCCAAAACTTCCCATGTATCCAAGTAAGCAATGAAATTGGAGCCAGGATTCTTGACTACATTCGCTCTACCAGGCATCCCCAAGTGAGGCTAAGCCCTTCCAGAACACATCTGGGCAACCCTGTGCCAACCAAAGTGGCATCCTTCTCATCTAGAGGACCTAGCTCCATTGCCCCGGCAATACTCAAGCCAGATATAGCAGGCCCCGGGTTCCAAATATTGGGAGCAGAACCTTCTTTTGTTCCAACGAGTACAAAATATTATCTCATGTCAGGAACATCAATGGCAACCCCTCATGTATCTGGGGCAGTTGCCCTGCTCAGGGCACTGAACAGGGAATGGTCCCCAGCAGCTATAAAATCGGCAATTGTCACAACAGCATGGACAACTGACCCTTCTGGAGAACCGGTTTTTGCCGAGGGACAGCCAATGAAGCTTGCTGATCCATTTGATTTTGGAGGTGGAATTCTGAACCCCAATGGTGCAGGAAACCCCGGTCTGGTGTATGATATGGGCAAAGACGATTGCATTCTGTACCTCTGCGCTATGGGTTACAACAACTCTGCTATTGCTAAGGTCACTGGACGACCCACATCATGCCCCTGCAACCGACCTTCAATTCTGGACGTAAACCTTCCTTCCATAACCATCCCAAACCTCCAATACTCGGTCTCTCTCACCAGAAGTGTCACAAATGTTGGAGCTGTTGACTCAGAGTACAACGCTGTTATCGACCCTCCACCAGGAGTCACCATAAAGTTAGAACCTGATAGGCTCGTCTTCAACTCCAAAATCAGAACCATCACTTTCAGAGTCATGGTTTCCTCAGCTCGCCGAGTGAGCACGGGATTCTCTTTCGGAAGCTTGGCTTGGTCTGATGGAGAGCATGCTGTAAGAATTCCCATATCAGTTAGAACACACACAATGAGTTCGCTCCATCATGGAAGTCTCATGCTAATTTTCTTAGCTTCTTCCATCTTGATTCTAAACGAGAAAGTTAGCTCGGTATCTCCGGCACAAGCCAAAAGCAAGGTCCACATCGTTTATTTGGGAAAGAGGCAGCACCATGATCCAGAATTCATCACCAACACTCATCATGAAATGCTCACTACAGTTCTTGGAAGCAAAGAAGCATCTGTAGATTCCATGCTCTACAGTTACAGACATGGCTTCTCTGGATTTGCAGCCAAGTTGACAGAAGCTCAAGCACAAGCAGTTTCAGAGTTACCTGATGTGGTTCAAGTCATGCCCTCCCGCCTTCATAAGCTGAAGACAACAAGGAGCTGGGATTACCTTGGCCTCTCCTCTTCACACTCTTCCACCAATCTCCTGCATGAAACCAACATGGGTGATGGAATCATCATTGGTCTTCTTGACTCAGGGATCTGGCCTGAATCAAAAGTTTTCAGCGATAAAGGTCTGGGGCCAATCCCGTCTAGATGGAAAGGTGGCTGCAGCTCAGGGCAGAGCTTCAATGCAACAAAGCACTGCAACAGAAAACTTATTGGAGCTCGTTATTTCTTAAAGGGACTTGAAGCAGAGATTGGAGAGCCATTGAATACCACTAAATACCTAGAATACTTGTCCCCGAGAGACGCACTTGGACATGGTACACATACATCTTCTATTGCTGGTGGTTCTCCTGTGGTCAATGCCAGCTACTATGGGCTTGGTTTTGGAACAGTGAGGGGTGGCGCACCTGGGGCTCGGCTGGCCATGTATAAAGCGTGCTGGAATTTGGGCGGGGGATTCTGCTCAGATGCTGATATACTGAAAGCTTTTGACAAAGCCATCCACGACGGAGTAGATGTCATCCTCATTGGTTCATTCCATGCTGTGGCACAGGGGATTTCGGTTGTTTGTGCAGCAGGAAATGGGGGCCCAAGTGCTCAAACAGTAGAGAATACAGCACCGTGGATATTAACTGTAGCAGCTAGCAGCATTGATCGGTCCTTCCCTACACCCATCACACTAGGCAACAACCGCACCGTCATGGGTCAAGCCATGCTCATTGGAAACCATACAGGCTTCGCCAGCTTAGTGTACCCAGATGACCCACATCTCCAGAGTCCTAGCAATTGTCTATCTATATCACCGAATGACACTTCAGTGGCTGGAAAAGTGGCGCTCTGCTTCACTTCAGGTACAGTTGAGACAGAATTTTCTGCATCTTTCGTGAAAGCAGCTCTTGGCCTGGGGGTAATTATTGCTGAGAATTCTGGAAACACCCAGGCATCATGCATCAGTGACTTCCCATGTATTAAAGTAAGCTACGAAACTGGAAGCCAGATACTCCACTACATCAGTTCGACCAGGCATCCCCATGTAAGGCTGAGCCCTTCTAAAACACATGTTGGGAAACCCGTGCCAACCAATGTGGCCTACTTCTCATCTCGAGGGCCAAGTTTCCCCAGTCCAGCAGTATTGAAGCCAGATATAGCAGGTCCAGGTGCCCAAATACTTGGGGCAGTTCCACCTTCTGATCTGAAAAAGAACACCGAATTTGCTTTCCATTCTGGAACATCCATGGCAACTCCTCATATTGCAGGCATTGTTGCACTACTCAAATCCCTGCACCCACATTGGTCCCCAGCTGCAATTAAATCAGCAATTGTCACAACAGGATGGACAACTGATCCGTCTGGAGAACCAATCTTTGCCGAGGGAGATCCAACAAAGCTCGCTGATCCATTTGATTTTGGAGGCGGAATTGTGAATCCGAATAGAGCAGCGGATCCTGGTCTAGTTTATGACATGGGTACAGCGGATTATATTCATTATCTCTGTACCTTGGGCTACAACAACTCTGCCATTTTTCAGTTCACAGAACAATCCATACGCTGCCCCACTCGAGAGCATTCTATTCTTGACTTGAATCTTCCTTCCATAACCATCCCAAGCCTCCAAAATTCAACCTCCCTCACCAGAAATGTCACAAATGTTGGAGCTGTCAACTCCACGTACAAAGCCTCTATCATATCCCCAGCAGGCACAACCATAACAGTAAAACCTGATACTTTGATTTTTGACTCTACCATCAAAACTGTTACCTTCAGTGTCACAGTTTCCTCAATTCAACAGGTGAACACAGGATACTCTTTTGGGAGCTTGACTTGGATTGATGGGGTGCATGCAGTGAGAAGCCCCATATCTGTGAGAACTATGATCAAAGAATCTTATGCTAATGACAGCTAA 5655 46.15 MAALLSLLPNPFSSSSSSSSPSLPSVPINTPATPQFSVALSATSHLHNWVSVINASITRTSQLKTLLLPKCFAINSTISSSDVFNDTGSLFSLFQGLGVDEREVELLLNKNPALRLASFDCVHERVCSLESLGINGVALYSLITKCPDVLTAPEIDPLISFIRDDLEGKIEPAQICRLLKAAEPRFLVGFDGKVRLLVHHGIPQERIAHVLNNVNLTRAICLKSAEEIEKTFTFLSRFGAVDIIIKRPAILNYDLESQLIPRVRVLVELSGGDDAATGVVLRKLPAILRYSEEHLGGHVEFLRSFAGLSDQEIFKIVCVFPNVFSASKERKLNPRIDFLKQCGLNSYDIFRFLIKAPLFLGLSFEENLVHKLSLLVKIGYQYRTRELAIAMGAVTRTSCENLQKVIGLFLSYGLSCEDIVAMSNKHPQILQYNPTSLKEKIEYLIEDMGREVDELLAFPAFLGYKLDDRIKHRYEVKKKIIGEGMSLNKLLSVYIVYMGERQHGNLDLITDGHHRMLSEVLGSDEASVESMVYSYKHGFSGFAAKLTEAQAQMFAELPDVVQVIPNRLHKLQTTRSWDYLGLPLDSPTSLLHETKMGDGTIIGLLDTGIWPESEVFMRGGAPRARLAMYKVCWNLYGGVCADADIFKGIDEAIHDGVDVLSLSISSDIPLFSHVDQHDGISIASFHAVVRGIPVVSAAGNSGPSAETVSNTAPWIITVAASTMDRLFATHITLGNNQTITGEAVYLGKDTGFTNLAYPEVSDLLAPRYCESLLPNDTFAAGNVVLCFTSDSSHIAAESVKKAGGLGVIVASNVKNDLSSCSQNFPCIQVSNEIGARILDYIRSTRHPQVRLSPSRTHLGNPVPTKVASFSSRGPSSIAPAILKPDIAGPGFQILGAEPSFVPTSTKYYLMSGTSMATPHVSGAVALLRALNREWSPAAIKSAIVTTAWTTDPSGEPVFAEGQPMKLADPFDFGGGILNPNGAGNPGLVYDMGKDDCILYLCAMGYNNSAIAKVTGRPTSCPCNRPSILDVNLPSITIPNLQYSVSLTRSVTNVGAVDSEYNAVIDPPPGVTIKLEPDRLVFNSKIRTITFRVMVSSARRVSTGFSFGSLAWSDGEHAVRIPISVRTHTMSSLHHGSLMLIFLASSILILNEKVSSVSPAQAKSKVHIVYLGKRQHHDPEFITNTHHEMLTTVLGSKEASVDSMLYSYRHGFSGFAAKLTEAQAQAVSELPDVVQVMPSRLHKLKTTRSWDYLGLSSSHSSTNLLHETNMGDGIIIGLLDSGIWPESKVFSDKGLGPIPSRWKGGCSSGQSFNATKHCNRKLIGARYFLKGLEAEIGEPLNTTKYLEYLSPRDALGHGTHTSSIAGGSPVVNASYYGLGFGTVRGGAPGARLAMYKACWNLGGGFCSDADILKAFDKAIHDGVDVILIGSFHAVAQGISVVCAAGNGGPSAQTVENTAPWILTVAASSIDRSFPTPITLGNNRTVMGQAMLIGNHTGFASLVYPDDPHLQSPSNCLSISPNDTSVAGKVALCFTSGTVETEFSASFVKAALGLGVIIAENSGNTQASCISDFPCIKVSYETGSQILHYISSTRHPHVRLSPSKTHVGKPVPTNVAYFSSRGPSFPSPAVLKPDIAGPGAQILGAVPPSDLKKNTEFAFHSGTSMATPHIAGIVALLKSLHPHWSPAAIKSAIVTTGWTTDPSGEPIFAEGDPTKLADPFDFGGGIVNPNRAADPGLVYDMGTADYIHYLCTLGYNNSAIFQFTEQSIRCPTREHSILDLNLPSITIPSLQNSTSLTRNVTNVGAVNSTYKASIISPAGTTITVKPDTLIFDSTIKTVTFSVTVSSIQQVNTGYSFGSLTWIDGVHAVRSPISVRTMIKESYANDS* 1885
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 21269850 21283495 - Vvi16g966 Vvi16g966 778615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g966 1884 SUPERFAMILY Subtilisin-like 1159 1795 IPR036852 GO:0004252|GO:0006508
Vvi16g966 1884 PANTHER PEPTIDASE S8 617 1131 - -
Vvi16g966 1884 PANTHER PEPTIDASE S8 1142 1883 - -
Vvi16g966 1884 PANTHER PEPTIDASE S8 486 616 - -
Vvi16g966 1884 SUPERFAMILY Subtilisin-like 571 987 IPR036852 GO:0004252|GO:0006508
Vvi16g966 1884 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.1-RELATED 486 616 - -
Vvi16g966 1884 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.1-RELATED 1142 1883 - -
Vvi16g966 1884 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.1-RELATED 617 1131 - -
Vvi16g966 1884 Gene3D Peptidase S8/S53 domain 1272 1744 IPR036852 GO:0004252|GO:0006508
Vvi16g966 1884 ProSiteProfiles Serine proteases, subtilase domain profile. 525 983 - -
Vvi16g966 1884 Gene3D Transcription termination factor 3, mitochondrial 297 494 IPR038538 -
Vvi16g966 1884 Gene3D Transcription termination factor 3, mitochondrial 61 271 IPR038538 -
Vvi16g966 1884 CDD PA_subtilisin_like 731 851 - -
Vvi16g966 1884 CDD Peptidases_S8_3 1241 1696 IPR034197 -
Vvi16g966 1884 ProSitePatterns Serine proteases, subtilase family, serine active site. 912 922 IPR023828 -
Vvi16g966 1884 SMART mt_12 420 451 IPR003690 GO:0003690|GO:0006355
Vvi16g966 1884 SMART mt_12 452 484 IPR003690 GO:0003690|GO:0006355
Vvi16g966 1884 SMART mt_12 241 272 IPR003690 GO:0003690|GO:0006355
Vvi16g966 1884 SMART mt_12 278 309 IPR003690 GO:0003690|GO:0006355
Vvi16g966 1884 SMART mt_12 314 345 IPR003690 GO:0003690|GO:0006355
Vvi16g966 1884 SMART mt_12 350 381 IPR003690 GO:0003690|GO:0006355
Vvi16g966 1884 PRINTS Subtilisin serine protease family (S8) signature 1270 1289 IPR015500 -
Vvi16g966 1884 PRINTS Subtilisin serine protease family (S8) signature 1352 1365 IPR015500 -
Vvi16g966 1884 PRINTS Subtilisin serine protease family (S8) signature 1659 1675 IPR015500 -
Vvi16g966 1884 Gene3D - 725 857 - -
Vvi16g966 1884 Gene3D - 1469 1605 - -
Vvi16g966 1884 ProSitePatterns Serine proteases, subtilase family, serine active site. 1660 1670 IPR023828 -
Vvi16g966 1884 Pfam Fibronectin type-III domain 1777 1872 IPR041469 -
Vvi16g966 1884 Pfam Fibronectin type-III domain 1029 1124 IPR041469 -
Vvi16g966 1884 Gene3D Peptidase S8/S53 domain 611 983 IPR036852 GO:0004252|GO:0006508
Vvi16g966 1884 Pfam Peptidase inhibitor I9 1165 1240 IPR010259 -
Vvi16g966 1884 Pfam Peptidase inhibitor I9 493 570 IPR010259 -
Vvi16g966 1884 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1150 1244 IPR037045 -
Vvi16g966 1884 ProSiteProfiles Serine proteases, subtilase domain profile. 1248 1731 - -
Vvi16g966 1884 Gene3D - 1748 1876 - -
Vvi16g966 1884 Gene3D - 1000 1127 - -
Vvi16g966 1884 Pfam mTERF 328 492 IPR003690 GO:0003690|GO:0006355
Vvi16g966 1884 Pfam mTERF 92 340 IPR003690 GO:0003690|GO:0006355
Vvi16g966 1884 Pfam Subtilase family 1270 1695 IPR000209 GO:0006508|GO:0008236
Vvi16g966 1884 Pfam Subtilase family 610 949 IPR000209 GO:0006508|GO:0008236
Vvi16g966 1884 CDD PA_subtilisin_like 1476 1594 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
14168 PF00082 Peptidase_S8 3.40E-37 No_clan Vvi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g966 - - vvi:100853897 1491.86