Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g985 ATGAGGCAGCACCATGATCCAGAACTCATCACCAACACTCATCATGAAATGCTCACTACAGTTCTTGGAAGCAAAGAAGCATCTGTAGATTCCATGCTCTACAGTTACAGACATGGCTTCTCCGGCTTTGCAGCCAAGTTGACAGAAGCTCAAGCACAAGCAGTTTCAGAGTTACCTGATGTGGTTCAAGTCATGCCCTCCCGCCTTCATAAGCTGAAGACAACAAGGAGCTGGGATTACCTTGGCCTCTCCTCTTCACATTCTTCCACCAATCTCCTGCATGAAACCAACATGGGTGATGGAATCATCATTGGTCTTCTTGACTCAGGGATCTGGCCCGAATCAAAAGTTTTCAGCGATAAAGGTCTGGGGCCAATCCCGTCTAGATGGAAAGGTGGCTGCAGCTCAGGGCAGAGCTTCAATGCAACAAAGCACTGCAACAGAAAACTTATTGGAGCTCGTTATTTCTTAAAGGGACTTGAAGCAGAGATTGGAGAGCCATTGAATACCACTGAATACCTAGAATACTTGTCCCCGAGAGACGCACTTGGACATGGTACACATACATCTTCTATTGCTGGTGGTTCTCCTGTGGTCAATGCCAGCTACTATGGGCTTGGTTTTGGAACAGTGAGGGGTGGCGCACCTGGGGCTCGGCTGGCCATGTATAAAGCGTGCTGGAATTTGGGCGGGGGATTCTGCTCAGATGCTGATATACTGAAAGCTTTTGACAAAGCCATCCACGACGGAGTAGATGTCATCCTCATTGGTTCATTCCATGCTGTGGCACAGGGGATTTCGGTTGTTTGTGCAGCAGGAAATGGAGGCCCAAGTGCTCAAACAGTAGATAATACAGCACCGTGGATATTAACTGTAGCAGCTAGCAGCATTGATCGGTCCTTCCCTACACCCATCACACTAGGCAACAACCGCACCGTCATGGGTCAAGCCATGCTCATTGGAAACCATACAGGCTTCGCCAGCTTAGTGTACCCAGATGACCCACATGTCGAGATGGCTGGAAAGGTGGCGCTCTGCTTCACTTCAGGTACATTTGAGACACAATTTGCTGCATCTTTCGTGAAAGAAGCTCGTGGCCTGGGGGTAATTATTGCTGAGAATTCTGGAAACACCCAGGCATCATGCATCAGTGACTTCCCATGTATTAAAGTAAGCTACGAAACTGGAAGCCAGATACTCCACTACATCAGTTCGACCAGGCATCCCCATGTAAGCCTGAGCCCTTCTAAAACACATGTTGGGAAACCCGTGCCAACCAATGTGGCCTACTTCTCATCTCGAGGGCCAAGTTTCCCTAGTCCAGCAGTATTGAAGCCAGATATAGCAGGTCCAGGTGCCCAAATACTTGGGGCAGTTCCACCTTCTGATCTGAAAAAGAACACCGAATTTGCTTTCCATTCTGGAACATCCATGGCAACTCCTCACATTGCAGGCATTGTTGCACTACTCAAATCCCTGCACCCACATTGGTCCCCAGCTGCAATTAAATCAGCAATTGTCACAACAGGATGGACAACTGATCCGTCTGGAGAACCAATCTTTGCCGAGGGAGATCCAACAAAGCTCGCTGATCCATTTGATTTTGGAGGTGGAATTGTGAATCCGAATAGAGCAGCGGATCCTGGTCTAGTGTATGACATGGGTACAGCGGATTATATTCATTATCTCTGTACCTTGGGCTACAACAACTCTGCCATTTTTCAGTTCACAGAACAATCCATACGCTGCCCCACTGGGGAGCATTCTATTCTTGACTTGAATCTTCCTTCCATAACCATCCCAAGCCTCCAAAATTCAACCTCCCTCACCAGAAATGTCACAAATGTTGGAGCTGTCAACTCCACGTACAAAGCCTCTATCATATCCCCAGCAGGCATAACCATAACAGTAAAACCTGATACTTTGATTTTTGACTCTACCATCAAAACTGTTACCTTCAGTGTCACAGTTTCCTCAATTCACCAGGTGAACACAGGATACTCTTTTGGGAGCTTGACTTGGATTGATGGGGTGCATGCAGTGAGAAGTCCCATATCTGTGAGAACTATGATCGAAGAATCTTCTGCTAATGACAGCTAA 2100 47.38 MRQHHDPELITNTHHEMLTTVLGSKEASVDSMLYSYRHGFSGFAAKLTEAQAQAVSELPDVVQVMPSRLHKLKTTRSWDYLGLSSSHSSTNLLHETNMGDGIIIGLLDSGIWPESKVFSDKGLGPIPSRWKGGCSSGQSFNATKHCNRKLIGARYFLKGLEAEIGEPLNTTEYLEYLSPRDALGHGTHTSSIAGGSPVVNASYYGLGFGTVRGGAPGARLAMYKACWNLGGGFCSDADILKAFDKAIHDGVDVILIGSFHAVAQGISVVCAAGNGGPSAQTVDNTAPWILTVAASSIDRSFPTPITLGNNRTVMGQAMLIGNHTGFASLVYPDDPHVEMAGKVALCFTSGTFETQFAASFVKEARGLGVIIAENSGNTQASCISDFPCIKVSYETGSQILHYISSTRHPHVSLSPSKTHVGKPVPTNVAYFSSRGPSFPSPAVLKPDIAGPGAQILGAVPPSDLKKNTEFAFHSGTSMATPHIAGIVALLKSLHPHWSPAAIKSAIVTTGWTTDPSGEPIFAEGDPTKLADPFDFGGGIVNPNRAADPGLVYDMGTADYIHYLCTLGYNNSAIFQFTEQSIRCPTGEHSILDLNLPSITIPSLQNSTSLTRNVTNVGAVNSTYKASIISPAGITITVKPDTLIFDSTIKTVTFSVTVSSIHQVNTGYSFGSLTWIDGVHAVRSPISVRTMIEESSANDS* 700
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 21420050 21423341 + Vvi16g985 Vvi16g985 778634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g985 699 ProSiteProfiles Serine proteases, subtilase domain profile. 77 546 - -
Vvi16g985 699 CDD PA_subtilisin_like 305 409 - -
Vvi16g985 699 Gene3D Peptidase S8/S53 domain 101 559 IPR036852 GO:0004252|GO:0006508
Vvi16g985 699 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 73 IPR037045 -
Vvi16g985 699 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.1-RELATED 254 698 - -
Vvi16g985 699 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.1-RELATED 2 254 - -
Vvi16g985 699 Pfam Peptidase inhibitor I9 7 69 IPR010259 -
Vvi16g985 699 CDD Peptidases_S8_3 70 511 IPR034197 -
Vvi16g985 699 PRINTS Subtilisin serine protease family (S8) signature 99 118 IPR015500 -
Vvi16g985 699 PRINTS Subtilisin serine protease family (S8) signature 181 194 IPR015500 -
Vvi16g985 699 PRINTS Subtilisin serine protease family (S8) signature 474 490 IPR015500 -
Vvi16g985 699 Pfam Subtilase family 99 510 IPR000209 GO:0006508|GO:0008236
Vvi16g985 699 PANTHER PEPTIDASE S8 2 254 - -
Vvi16g985 699 PANTHER PEPTIDASE S8 254 698 - -
Vvi16g985 699 Pfam Fibronectin type-III domain 592 687 IPR041469 -
Vvi16g985 699 Gene3D - 298 420 - -
Vvi16g985 699 ProSitePatterns Serine proteases, subtilase family, serine active site. 475 485 IPR023828 -
Vvi16g985 699 Gene3D - 563 691 - -
Vvi16g985 699 SUPERFAMILY Subtilisin-like 8 647 IPR036852 GO:0004252|GO:0006508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g985 - - vvi:100264034 1374.38