Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g991 ATGGCATCAGATCCGAAGATTCACTTGTTCGAAGAGGTCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTTTGCTATCAGCAACTGGGAAGGATGCGACAAATGATTTTGAAGATGTAGGCCACAGTGATGCAGCCAGAGACATGATGGAAAAATACTACATTGGTGAGATCGATCCCTCAAGCGTTCCTCTAAAACGGACTTTCATTCCAGCCCAGCAAGCCGCCTACAATCATGATAAGACCTCTGAATTTGTGATTAAGATTTTACAATTCCTTGTGCCCCTGTTGATCTTGGGCTTAGCCTTTGTGGTTCGACAATACACCAAAAAGGAATAG 405 43.95 MASDPKIHLFEEVAKHNQTKDCWLVISGKVYDVTPFMDDHPGGDEVLLSATGKDATNDFEDVGHSDAARDMMEKYYIGEIDPSSVPLKRTFIPAQQAAYNHDKTSEFVIKILQFLVPLLILGLAFVVRQYTKKE* 135
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 21470775 21473444 - Vvi16g991 Vvi16g991 778640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g991 134 PANTHER CYTOCHROME B5-LIKE 1 132 - -
Vvi16g991 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 88 IPR036400 -
Vvi16g991 134 SMART Cyt_b5_2 8 81 IPR001199 -
Vvi16g991 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Vvi16g991 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Vvi16g991 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Vvi16g991 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Vvi16g991 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Vvi16g991 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 80 IPR001199 -
Vvi16g991 134 Gene3D - 1 86 IPR036400 -
Vvi16g991 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Vvi16g991 134 PANTHER CYTOCHROME B5 1 132 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g991 K23490 - vvi:100265799 275.018