Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi17g116 | ATGCTGTTGATCTTCTCCAGCTTTGACAACCGGCTCTCGAACATTTCGAATTTGATCGAAACGAAGACGGAGGTGGACCAGTTCGAGGCGGCGGAGAAGGTGATTATGAGGTGGGACTCGAACTCGGAGGCGTCGAGGCACACGCTACCGTGGGACGAGGCGCCGGAGGAGGCCGCCGAGTATTTGGCGGCGGTGGACGAGATCTTGCAGATGACGGAGGATTTGGCGATTCGATCGGACGGCGAGATGATGGATCGCGCCGAGAGTGCACTCCAGGTGGCGATGACGAGGCTGGAGGACGAGTCTGGGTACGAGAAGGAGTGTTGTCAGAAATTGAGTATTGAGGAAGTTCAGAAGATTGAGTGGAGGTCATTGGATGAGAAGATGAAGAAATGGATGCAAGCTGTGAAGATTGTTGTTAGGGTTCTTCTGTGGGGTGAGAAGAGGCTCTGTGACCAAGCTTTTAGTGGCTCCGATTTGATTAAGGAGGTTTGCTTCACTGAGACTGCCAAGAGTTGTGTGATGCAGTTGTTGAATTTCGGTGAGGCTGTTGCCATTGGGAGGAGATCCTCTGAGAAGCTTTTCCGCATACTCGATATGTATGATGCCTTGGCAGATGTGTTGCCAGACTTGGAAGCCTTGTTTTCAGATGAGTCGGGGCAGTTTGTCTGGAGTGAGGCCCGAGGAGTGCTGGCAGGCCTGGGGGAAGCGGCAAAGGGAACGTTTGCAGAGTTTGAGAATGCAGTTCGCTCTGAGACATCCAGGAGACCCATTCAAGGTGGAAATACACCCCCAATTGGGCGTAGGTTGTTGTTGTTGATGTCATGCCTGGAATCCAACCTCACAGAGAAATCGAAGCTTTACGAGGATAATGCAATGCAATATATTTTCTTGATGAACAACATTCTTTACATAGTTCAGAAAGTGAAAGACTCTGAGCTTGGCAAGATTTTGGGAGATCACTGGGTCCGGAAGCGTCGTGGACAGATTCGCCAATATGCCACTAGTTATCTCAGAGCTTCATGGAGCAAGGTCCTGGCTTGTCTCAAGGATGAAGGCATTGGTGGGAGCTCAAGCAATGCCTCCAAGATGGCCCTTAAAGAAAGATTTAAAAATTTCAATGCATGCTTCGAAGATATTTATAGGATCCAGACAGCTTGGAAGGTCCATGATGCCCAACTCAGGGAAGAGCTTCGAATTTCTATATCAGAAAAGGTAATTCCCGCCTACCGTTCATTTATGGGTAGGTTTGGGAATAATCTAGAGAGTGGAAGAAATGCTGGAAAGTACATCAAATACACACCTGAGGATCTAGAGAACTACTTGTTGGATTTATTCGAAGGATCATCCCTTGTTCTGCACCATATGAGAAGAAAAACTGCATAG | 1386 | 48.41 | MLLIFSSFDNRLSNISNLIETKTEVDQFEAAEKVIMRWDSNSEASRHTLPWDEAPEEAAEYLAAVDEILQMTEDLAIRSDGEMMDRAESALQVAMTRLEDESGYEKECCQKLSIEEVQKIEWRSLDEKMKKWMQAVKIVVRVLLWGEKRLCDQAFSGSDLIKEVCFTETAKSCVMQLLNFGEAVAIGRRSSEKLFRILDMYDALADVLPDLEALFSDESGQFVWSEARGVLAGLGEAAKGTFAEFENAVRSETSRRPIQGGNTPPIGRRLLLLMSCLESNLTEKSKLYEDNAMQYIFLMNNILYIVQKVKDSELGKILGDHWVRKRRGQIRQYATSYLRASWSKVLACLKDEGIGGSSSNASKMALKERFKNFNACFEDIYRIQTAWKVHDAQLREELRISISEKVIPAYRSFMGRFGNNLESGRNAGKYIKYTPEDLENYLLDLFEGSSLVLHHMRRKTA* | 462 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 1030105 | 1032033 | + | Vvi17g116 | Vvi17g116 | 778813 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi17g116 | 461 | SUPERFAMILY | Cullin repeat-like | 26 | 447 | IPR016159 | - | |
Vvi17g116 | 461 | Pfam | Exo70 exocyst complex subunit | 265 | 443 | IPR046364 | GO:0000145|GO:0005546|GO:0006887 | |
Vvi17g116 | 461 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 17 | 101 | IPR004140 | GO:0000145|GO:0006887 | |
Vvi17g116 | 461 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 265 | 460 | IPR004140 | GO:0000145|GO:0006887 | |
Vvi17g116 | 461 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 110 | 268 | IPR004140 | GO:0000145|GO:0006887 | |
Vvi17g116 | 461 | Gene3D | Exocyst complex component Exo70 | 33 | 269 | - | - | |
Vvi17g116 | 461 | Gene3D | Exocyst complex component Exo70 | 270 | 453 | - | - | |
Vvi17g116 | 461 | PANTHER | EXOCYST SUBUNIT EXO70 FAMILY PROTEIN | 17 | 101 | - | - | |
Vvi17g116 | 461 | PANTHER | EXOCYST SUBUNIT EXO70 FAMILY PROTEIN | 110 | 268 | - | - | |
Vvi17g116 | 461 | PANTHER | EXOCYST SUBUNIT EXO70 FAMILY PROTEIN | 265 | 460 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi17g116 | K07195 | - | vvi:100268151 | 676.011 |