Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g120 ATGGCCATGTGGGTTTTTGATGATCTTGTCGAAGGTCTCTTTCTAGTTCTTCTGTTTCTGTTTCTTACGATTACATTTTCTGTTGGGTTTGAGCATGCTTTCAAGAAAAAAGCATGCCGTTTTGGTCCTCCATCGTACCCGTTCATTGGATGTCTGGTTTCATTCTACCAGAACCGCCGCCGGCTGCTGGAGTGGTACACTGATCTTTTATCGGAGTCTCCGAGCCAGACCATCGTGGTGCACCGGCTGGGTGCGCGGCGGACGGTCGTGACGGCGAACGCTGCCAATGTGGAGTACGTGCTGAAGACGAACTTCAGCAACTTCCCCAAGGGGAAGCCCTTCACTGAGATTCTTGGAGACCTTCTTGGCTTCGGGATATTCAACGTTGACGGCGACCTGTGGAGCTCGCAGAGGAAGCTCGCCAGCCATGAGTTCAGCACCAAGTCTCTGCGAGAGTTCGTGATGAGAATCCTTGAAGAAGAAGTGGAGGGGAGGCTACTTCCGTTGTTAGAATCCGCAATGGAGAAAAATGAATTCCCTGTTTTTCAGGCTGGTCCGAGGGTGTGCTTGGGGAAAGAGATGGCGTTCATTCAGATGAAGTACGTGGTGGCTTCCATTTTGAGAAGGTTCGAGATCAGGCCGGCCGGGTCGAACCGGCCGGTTTTCGTTCCCCTCCTGACGGCTCACATGGCCGGCGGTTTCAAAGTGGTGGTCCGGAAAAGAAGTGGCGGAAATGAGCCGTAA 744 52.69 MAMWVFDDLVEGLFLVLLFLFLTITFSVGFEHAFKKKACRFGPPSYPFIGCLVSFYQNRRRLLEWYTDLLSESPSQTIVVHRLGARRTVVTANAANVEYVLKTNFSNFPKGKPFTEILGDLLGFGIFNVDGDLWSSQRKLASHEFSTKSLREFVMRILEEEVEGRLLPLLESAMEKNEFPVFQAGPRVCLGKEMAFIQMKYVVASILRRFEIRPAGSNRPVFVPLLTAHMAGGFKVVVRKRSGGNEP* 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 1060848 1062387 + Vvi17g120 Vvi17g120 778817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g120 247 SUPERFAMILY Cytochrome P450 34 164 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g120 247 Gene3D Cytochrome P450 169 245 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g120 247 PANTHER CYTOCHROME P450 94B3 30 175 - -
Vvi17g120 247 PANTHER CYTOCHROME P450 94B3 178 240 - -
Vvi17g120 247 Pfam Cytochrome P450 178 215 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g120 247 Pfam Cytochrome P450 42 160 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g120 247 SUPERFAMILY Cytochrome P450 175 241 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g120 247 Gene3D Cytochrome P450 34 168 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g120 247 PANTHER CYTOCHROME P450 178 240 - -
Vvi17g120 247 PANTHER CYTOCHROME P450 30 175 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g1175 Vvi17g120 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g120 K20665 - vvi:100245827 332.413