Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g14 ATGATTTGGCATCATCAAAACGCAATTAGGAGAACCCTTAGGGTAACAAAAATATCTTCCATTATTCTCATGTTCAAGTCCCATAAAAAAAAACATTCTTCCTATGCACCTGAGAAGGGGGTTCTCTATGATGGAATATACATAATTGAGAAATGTTGGAGAAAAGTTGGAATTCAAAGGTATAAGGTTTGTAGGTACCTATTTGTTAGATGTGACAATGAACCCACCCCATGGACAAGTGATGAACATGGGGACCGACCTAGACCCCTTGCTAGAGATTCCGGAGTTAAATGTCACGGACTTGGTCTTTTCCTAAACTCAAGGAAAGTCCATCATGGGACTTTGATGACAATACACTCCTATGGAAGTGGAAAAGAACTCCACCTGTCAGCCGTAAACTTGTGGACACTGGAAATTCCGTGA 423 40.66 MIWHHQNAIRRTLRVTKISSIILMFKSHKKKHSSYAPEKGVLYDGIYIIEKCWRKVGIQRYKVCRYLFVRCDNEPTPWTSDEHGDRPRPLARDSGVKCHGLGLFLNSRKVHHGTLMTIHSYGSGKELHLSAVNLWTLEIP* 141
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 88281 90652 + Vvi17g14 Vvi17g14 778711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g14 140 Pfam SAD/SRA domain 12 73 IPR003105 -
Vvi17g14 140 Gene3D - 5 98 IPR036987 -
Vvi17g14 140 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 22 91 IPR045134 -
Vvi17g14 140 SUPERFAMILY PUA domain-like 1 92 IPR015947 -
Vvi17g14 140 ProSiteProfiles YDG domain profile. 1 70 IPR003105 -
Vvi17g14 140 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 22 91 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g1353 Vvi17g14 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g14 K10638 - qsu:112013932 131.339