Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g167 ATGGGCAAAGAGGAAAGCCCACAAATTACCAGAAGAACAACCCGATCCTCCTCTTCCACCCCCATTCTAAAGAATGGCGAGGAAACAACAAAAACAAGTGAACCCCACCCTCTTACAATCAATGACCTTGTATTTGGAGGGGAACCCATAAAATTGGATGAACTACTATCTAGTTTCCCTGGCAGAAGGATTCAAATTCTTGAGCTCATGCGTCTGTTGGGTCCTTTGAACTCTCCTATGCTTCCTCTCTTTCTTTATGGAGGTACCTCTACAGGAAAAACGAGCATAATTCTTCAGATATTCAGACATCTCAACCGCCCATTTGTTTACTCAAGCTGTCTTACATGTTACAGTCCCCGGATATTGTTTGAATCCATCATGAACCAGCTGCTGCTTCATAGAAAGAATGCAGACAATGGTTATGCGAGCGCAAAGCGCTGTGAAAGGCCATCTGATTTTGTTGTTTCCCTTCGGGAAGCATTAACTAATCCGGCGGGACAGGCTAATGGAAGGATGATTTACTTGATATTTGACAATTTGGAGCTTGTTCGAGAATGGGATAAAAGTTCTAGTATATTGCCATTTCTCTTTGAGCTTTATGATATTCTAAATATGCCTGAGGTGGGTCTAATCTTTATCAGTAAGGTGTCACCTGATGCATATTACTCAGATAGAGGTTATGTTGAACCTATCCCGATTCTTTTTCCTGATTATACAGAGGATAGTCTTCGCCAAATCTTCATGAGGAACCAAGCAAACCCAAAGCTCTATTCCTCTTTTCTTGATGTTGTATTAAGGACTTTCTCTAGAATTACTAGACGGGTTGATGAGTTATCTACTGCCTTTTCACCATTATTTAAAAAATACTGTGAACCCTTGAGTGATCCTGGACTTGTTCCCAATGAAGACATGAAGAGAAAGCTGTTTAGCCACCTTCAACCACATCTTGCTCCTGCTCTGAATGAAATATTTAAAGTTCAATCTCAGCCTTCCCCTGAAGTTGAAGCCAAGCAGGAGAAAGTGAAGCGGAAAAGCAATGCAAACAAATTGGGAGGTCGTGAAGCTTTTGATGAGATCGATTTCCATATGTCTACTTCTGCAAAATATCTTATTATTTCGGCATTCCTTGCTTCAAGAAACCCAGCTACCCTTGATGCATCACTATTTGATTCCACTGGGGGTTCGGATAATCGGAAACGAAAGAGGAAGAGTTCTGAAAAATCAATGGAGCAGAAAGAAACAGCAGAGCAGGAATTGCTTATGAAGGGACCTGGAACTTTCCCATTGGAGAGATTATTGGCCATATTTCAGTGTCTCACATCTGTGGTAGAAAGTTCACTGGGTGAAGACCAACAAATAAATGAAGGCTTGGGAGCTGGTAATGGGGATAGTGGTCTAATGTCTGATGTTCTTTTGCAGCTATCCAGTCTCTGTAATGCTAATTTTATTAGCAAAGGAGGGAGTTGCCCATTAGAAGGCTCAACCCGATACCGAGCTACCATTTCTGAAGATCTGGCTCTGAAGGTAGCAAGGAGCCTAAAGTTCCCTCTCTCGAAGTACTTGTATAGAGGATAA 1575 41.71 MGKEESPQITRRTTRSSSSTPILKNGEETTKTSEPHPLTINDLVFGGEPIKLDELLSSFPGRRIQILELMRLLGPLNSPMLPLFLYGGTSTGKTSIILQIFRHLNRPFVYSSCLTCYSPRILFESIMNQLLLHRKNADNGYASAKRCERPSDFVVSLREALTNPAGQANGRMIYLIFDNLELVREWDKSSSILPFLFELYDILNMPEVGLIFISKVSPDAYYSDRGYVEPIPILFPDYTEDSLRQIFMRNQANPKLYSSFLDVVLRTFSRITRRVDELSTAFSPLFKKYCEPLSDPGLVPNEDMKRKLFSHLQPHLAPALNEIFKVQSQPSPEVEAKQEKVKRKSNANKLGGREAFDEIDFHMSTSAKYLIISAFLASRNPATLDASLFDSTGGSDNRKRKRKSSEKSMEQKETAEQELLMKGPGTFPLERLLAIFQCLTSVVESSLGEDQQINEGLGAGNGDSGLMSDVLLQLSSLCNANFISKGGSCPLEGSTRYRATISEDLALKVARSLKFPLSKYLYRG* 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 1529099 1531743 + Vvi17g167 Vvi17g167 778864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g167 524 Gene3D - 59 221 IPR027417 -
Vvi17g167 524 Pfam AAA ATPase domain 59 199 IPR041664 -
Vvi17g167 524 MobiDBLite consensus disorder prediction 394 416 - -
Vvi17g167 524 MobiDBLite consensus disorder prediction 11 37 - -
Vvi17g167 524 MobiDBLite consensus disorder prediction 1 38 - -
Vvi17g167 524 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 51 523 IPR020796 GO:0000808|GO:0005634|GO:0006260
Vvi17g167 524 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 290 IPR027417 -
Vvi17g167 524 Coils Coil 398 418 - -
Vvi17g167 524 MobiDBLite consensus disorder prediction 386 416 - -
Vvi17g167 524 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 233 521 IPR020796 GO:0000808|GO:0005634|GO:0006260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g167 K02607 - vvi:100243867 1006.13