Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g263 ATGGGAAGTGAGAGTATGGTCTCTGTGAAAACAAAACTTCTTGCAGCATTGCTTGTTCTGCAGCTCTGCTATGCAGGGACTCACATTGTCTCCAGGGTTGCACTAAACATTGGTGTCAGCAAGGTTGTATACCCAGTTTATAGGAACCTCATTGCCCTGCTTCTGTTGGGCCCTTTTGCTTATTTCTCAGAGAAGAAGGAGAGACCACCTCTTACTTTCTCTTTGCTGGTTCAGTTCTTCCTTCTAGCATCGCTGGGAATCACTGCAAACCAAGGCTTTTATCTCTTGGGGTTGTATTATGCATCTCCAACTTTTGCATCTGCAATGCAGAACTCAGTTCCAGCAATCACTTTTGTCATGGCTTTTGCTCTGAGGCTTGAGAAGGTTGATATCTCAAGGAGATATGGACTGGCAAAGGTGCTGGGAACCATTGCAAGTATAGGAGGTGCCACAATCATCACTATCTACAAGGGCCCTCCTCTTCTGCACCAGACACATCCCCAACCGGGAAATTCCTTGGAGGAAGACATGTATTCCAGGAAAATGCAGAACTGGACATGGGGCTGTGTATACCTGGTTGGACACTGCCTATCATGGGCTGGTTGGATGGTCCTTCAGGCACCTGTGTTGAGGAACTATCCAGCTAAACTCAGTCTCACTTCATTTACGTGCTTCTTTGGATTGATCCAGTTCTTGATCATAGCAGCCTTTGTAGAAACCAACCCTGAGCTCTGGAAAATTCAATCAGGAGAAGAGCTTTTCACAATTCTATATGCTGGAGTTGTGGCAGCTGGGATCGTCTTCTCCCTTCAAACATGGTGTATTCAAAAAGGAGGTCCTGTTTTTGTTGCTGTCTTCCAGCCCATGCAGACACTTTTAGTCGCTGTCATGGCATCTCTAATTCTTGGCGATCAGTTATACCTTGGAGGGATTATCGGTGCAGCTCTCATTATGATTGGTCTTTACTCGGTTCTATGGGGTAAAACAGAAGAAAAGAGAGTAGGAAGCCAAGATCAGGAACGGACATTGACAAAGCATCTTCTTGATACTGAAAATAGAGATAAAGATGATGCTCCTGCATCAGACATTCCATGA 1095 45.21 MGSESMVSVKTKLLAALLVLQLCYAGTHIVSRVALNIGVSKVVYPVYRNLIALLLLGPFAYFSEKKERPPLTFSLLVQFFLLASLGITANQGFYLLGLYYASPTFASAMQNSVPAITFVMAFALRLEKVDISRRYGLAKVLGTIASIGGATIITIYKGPPLLHQTHPQPGNSLEEDMYSRKMQNWTWGCVYLVGHCLSWAGWMVLQAPVLRNYPAKLSLTSFTCFFGLIQFLIIAAFVETNPELWKIQSGEELFTILYAGVVAAGIVFSLQTWCIQKGGPVFVAVFQPMQTLLVAVMASLILGDQLYLGGIIGAALIMIGLYSVLWGKTEEKRVGSQDQERTLTKHLLDTENRDKDDAPASDIP* 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 2877373 2879496 - Vvi17g263 Vvi17g263 778960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g263 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 329 - -
Vvi17g263 364 MobiDBLite consensus disorder prediction 337 364 - -
Vvi17g263 364 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020|GO:0016021
Vvi17g263 364 Pfam EamA-like transporter family 17 153 IPR000620 GO:0016020|GO:0016021
Vvi17g263 364 PANTHER WAT1-RELATED PROTEIN 9 338 - -
Vvi17g263 364 PANTHER WAT1-RELATED PROTEIN 9 338 IPR030184 GO:0016021|GO:0022857
Vvi17g263 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 144 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g263 - - vvi:100249272 684.871