Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g290 ATGCATCCCAATTTGTCCCCTTCTTCCTTGGTCATCCCTGCCATCATCTTTCTCCTCTCCCACCAATTCTCAAACTTTGTATGCAGTGACGAATTTCACTATTCAAACTGCAATTCTCCGGTGGAATGCGGTGGATTGGGCAAAATCGAGTACCCTTTCTGGGTAAACGGCGCCCAGCCTGATTACTGTGGCCATCCCAGGTTCAAGCTGGATTGCCTGCGTGGTGATTTTCCCACCATACAGATCATGCACCGGGACTATCTTGTCATGGACATCGATTATGACACCCAAATCCTAAAGATGGCGACCTTCTATGAATTCTTTTGTCCTGAATTCGACATAACCATGGATTCAACTCTCTTCAGCTATACTTCCGACGTTGAAATCGCCACCGTATTTTACGATTGTTCCTCCACTGATCCACACCCAGGATCTTACAACTTTTCCTGCGTGATCGATAGCTTTCCAAGCCACGCTTATTTGGTTACGAATACGTCAGCGGCAAGTGAGTTCGCATCGGAATGCAAGTTCAGTGCTTCAGTTCCAGTGGTCGTGCCAAAGTCAGCAGACGGTGTGAAAGAGATATTGAGTTCCGTGTTTAAGGTGAACTGGACGGTAAACAAGACAGAATGCGATGAATGCGTTGGGTCTGGGGGTAGGTGTGGATATAACAGCACCTTGGACCAACCTTGCTGTTTTTGTCCTGATAACCCTTACCGAAACAAATGTCCAAATCTACGTTCAAGTATGTACCCCTCTTCTCTTTCCATGCTTTTCAGTCTTTGA 786 46.44 MHPNLSPSSLVIPAIIFLLSHQFSNFVCSDEFHYSNCNSPVECGGLGKIEYPFWVNGAQPDYCGHPRFKLDCLRGDFPTIQIMHRDYLVMDIDYDTQILKMATFYEFFCPEFDITMDSTLFSYTSDVEIATVFYDCSSTDPHPGSYNFSCVIDSFPSHAYLVTNTSAASEFASECKFSASVPVVVPKSADGVKEILSSVFKVNWTVNKTECDECVGSGGRCGYNSTLDQPCCFCPDNPYRNKCPNLRSSMYPSSLSMLFSL* 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 3231772 3232558 - Vvi17g290 Vvi17g290 778987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g290 261 PANTHER OS01G0690200 PROTEIN 8 249 - -
Vvi17g290 261 Pfam Wall-associated receptor kinase galacturonan-binding 37 101 IPR025287 GO:0030247
Vvi17g290 261 Pfam Wall-associated receptor kinase C-terminal 162 236 IPR032872 -
Vvi17g290 261 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN 8 249 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g861 Vvi17g290 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g290 - - vvi:104882349 550.821