Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g337 ATGGGGAAGAACGAGTTTCTGACGCCAAAAGCGATTGCGAATCGGATCAAAGCCAAGGGTTTGCAGAAGCTGCGATGGTATTGTCAAATGTGCCAAAAACAATGCCGGGACGAGAATGGATTCAAGTGTCATTGTATGAGCGAGAGCCACCAACGTCAGATGCAAGTCTTTGGCCAAAACCCTAATCGCATCATCGACGGTTATTCAGAGGAGTTCGAGCGCGAATTCCTTGAGCATATGAAGCGCAGCCACCGCTTCAGCCGTGTCGCCGCCACCGTCGTCTACAACGAGTACATCGCCGACCGCCACCACATCCATATGAACTCTACCGAGTGGGCTACGCTGACCGAGTTTGTGAAGTATTTGGGGCGAACCGGGAAGTGCAAGGTCGAGGAGACGCCGAAAGGGTGGTTTATCACCTATATTGATCGAGATTCGGAGACTCTATTCAAAGAGAGGCTGAAGAATAAGCGAATGAGGGCAGACATGCTAGTATCTCTGAAATCAGAGAATGGTGGTAAGATCGCCTTTGCCCTGGGTTCATCTAAACTTATTGTGAAAGAAAAAGTGGAGAGCTCGAAATTGGTGTTTGAGGATGGTGAGAGTGAGAACATTGTGAAAGGTAAAGGTGCTGGTGGCAGTGGGATTGGGGGCGTATCAGCATTAGATGAATTAATGAGAGAGCAAGAGAAGGTGAAGGAACGGAATAACAGAAAGGATTATTGGTTGTGCGAGGGAATTGTTCATGTGCTTAGAGTTGATCAAGAGGAGCTGGAGACTGTCATTCCACAAATCGGAGGTCTTTTGAGGATTAAGGGAATTTATGATGGAAGGGTGCTTCAGGCAGTTGAATATGAAGATATTTGCAAAGTTGGGCAGTGA 882 47.51 MGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMQVFGQNPNRIIDGYSEEFEREFLEHMKRSHRFSRVAATVVYNEYIADRHHIHMNSTEWATLTEFVKYLGRTGKCKVEETPKGWFITYIDRDSETLFKERLKNKRMRADMLVSLKSENGGKIAFALGSSKLIVKEKVESSKLVFEDGESENIVKGKGAGGSGIGGVSALDELMREQEKVKERNNRKDYWLCEGIVHVLRVDQEELETVIPQIGGLLRIKGIYDGRVLQAVEYEDICKVGQ* 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 3774074 3775250 + Vvi17g337 Vvi17g337 779034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g337 293 Pfam Domain of Kin17 curved DNA-binding protein 52 162 IPR019447 -
Vvi17g337 293 Gene3D - 60 160 IPR038254 -
Vvi17g337 293 SMART Kin17_mid_2 52 168 IPR019447 -
Vvi17g337 293 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 166 248 IPR037321 -
Vvi17g337 293 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 249 271 IPR037321 -
Vvi17g337 293 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 168 IPR037321 -
Vvi17g337 293 PANTHER BNAA05G13760D PROTEIN 166 248 - -
Vvi17g337 293 PANTHER BNAA05G13760D PROTEIN 249 271 - -
Vvi17g337 293 PANTHER BNAA05G13760D PROTEIN 1 168 - -
Vvi17g337 293 SUPERFAMILY beta-beta-alpha zinc fingers 26 63 IPR036236 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g337 K13102 - vvi:100256009 534.258