Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g35 ATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTCAAGGAGCAGGGAGTTAAAGGCTTCTTCAGGGGTTGGGTACCAACCCTGCTTGGTTACAGTGCTCAGGGAGCCTGCAAGTATGGGTTCTACGAGTTCTTTAAGAAATACTACTCAGATATTGCTGGTCCTGAGTATGCAACCAAGTACAAGATATTGATTTATCTTGCTGGGTCTGCATCTGCTGAAATTATTGCTGATGTTGCCCTATGTCCCATGGAGGCTGTGAAGGTTCGTGTCCAAACTCAGCCTGGTTTTGCCAGAGGATTGTCGGATGGTCTTCCTAAGTTTGTCAAGTCTGAAGGTGCTCTTGGGTTGTACAAGGGTCTTGTTCCTCTATGGGGACGACAGATTCCATATACAATGATGAAGTTTGCATCCTTTGAGACTATTGTGGAGATGTTATATAAGTATGCCATTCCAACCCCCAAGGAACAGTGCAGCAAATCTTTGCAACTTGGGGTGAGCTTTGCTGGTGGATATGTGGCTGGTATATTATGTGCTATCGTGTCACACCCTGCTGACAACCTGGTCTCTTTTCTGAACAATGCCAAGGGGGCGACTGTGGGTGATGCTGTGAAGAATCTAGGACTGTGGGGTCTCTTCACCCGTGGTCTTCCTCTTCGTATAGTCATGATTGGAACCCTTACAGGAGCCCAATGGGGTATCTACGATACTTTCAAAGTTTTTGTTGGGCTGCCAACAACTGGAGGTGTTACTCCTGCTCCTGCTGCCACTGTTCCTGCAAAGGTGTGA 846 46.81 MAVTPLDLVKCNMQIDPTKYKSISSGFGVLLKEQGVKGFFRGWVPTLLGYSAQGACKYGFYEFFKKYYSDIAGPEYATKYKILIYLAGSASAEIIADVALCPMEAVKVRVQTQPGFARGLSDGLPKFVKSEGALGLYKGLVPLWGRQIPYTMMKFASFETIVEMLYKYAIPTPKEQCSKSLQLGVSFAGGYVAGILCAIVSHPADNLVSFLNNAKGATVGDAVKNLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDTFKVFVGLPTTGGVTPAPAATVPAKV* 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 286803 292529 + Vvi17g35 Vvi17g35 778732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g35 281 PANTHER PHOSPHATE CARRIER PROTEIN 1 274 - -
Vvi17g35 281 SUPERFAMILY Mitochondrial carrier 2 256 IPR023395 -
Vvi17g35 281 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 67 IPR018108 -
Vvi17g35 281 Gene3D Mitochondrial carrier domain 1 261 IPR023395 -
Vvi17g35 281 ProSiteProfiles Solute carrier (Solcar) repeat profile. 80 164 IPR018108 -
Vvi17g35 281 Pfam Mitochondrial carrier protein 2 69 IPR018108 -
Vvi17g35 281 Pfam Mitochondrial carrier protein 82 168 IPR018108 -
Vvi17g35 281 ProSiteProfiles Solute carrier (Solcar) repeat profile. 181 260 IPR018108 -
Vvi17g35 281 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 274 IPR044677 GO:0005315|GO:1990547
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g1108 Vvi17g35 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g35 K15102 - vvi:100261124 524.242