Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g370 ATGGAGGCGCGTCGAACCTCTCGAATCCCCATCGATCCTAAAGTGCGCCAGGTAGGGTTTTTTGCCCCCGGTGCACTGCGGGATCGCTCACAGTCTGGTCCCCTTGGGTTCTCGTCGTCGCCTCCAGTCTCCAACATCTCGCCGACGGGAAACTCCCTCTCACCGGTCATGATCCCACCGCCGCGGCACGCATCCGACAACTTTGTGCTGTCGCGGCCCCTTGCAGTGCCGGTTTCGGATTCGACGCTTCGGCCGCCGGCGGTGGAAGATCGCATGGCGGTTGGGAGCTACGACGCTTCGGAGTTGCTTCTCGGGACGTCGGCGTCCAGCAGGATCGGAGACGGGGAGTTCTCCGAGGACTATTCGGTTTTTTTTCGCCGGAGCAGTTCGGGGAAGTTTGCTTCGTCTTTGCCGAGCGGTGGGTTTGATTCGACGGCGATGAAAATTAATCCTCCTGCGGTGGTTCCAGCCGTAAAAAAATATGCCGCAAAAAAACCTGCCGCAGTGATTGAAAAGAGTGGAGGAGCAGTTGCAGAAATGCAAAATGAATTGCCAACAAGCTCAAAACCATTGAAAGAGAAAACTACAAAGGCTGAAAGACGTGCCCTTCAGGAGTCTCAACGAGCAGCAAAAGCTGCTGGAAAAGCTGGAGGAAATAAACCAGCTGCTGCTTCTGGGGCTGCAACTCCAATGAAAGAAAAGGCAAGTAAAGCTGTGAAGCAGGTTCCATCTTCTGTTGCTGCTTCTGACAAAAAAGGAGGTGAGCGGATTCCAGAAAAAGATAAGAAGAAAGATGTTCCTCCTCCTCGCATGCAATTTGACGACAAGAACAGGGTGGAAAAGGCTAAAAGGCGTGCAGTGGTCAAACCAACTGAAGCTAGAAACAGAGTTGAACTGTTCCGGCATTTGCCTCAATACGAACATGGAACCCAGCTCCCCAAACTTGAGTCAAAATTTTTTCAACTTGATCCAGTGCATCCTGCTGTTCAAAAGGTTGGATTCCAGTATTTGGCAGGAGATATAGTTGGGGGTAATGCCCGTTGCATTGCAATGCTTCGAGCATTTCAGGAAGCCATTAAAGACTACTCCATGCCACCTGAAAAAACTCTAGCAAGAGATTTAACTGCAAAAATCAGCAGTTATGTTTCATTTTTGAATGAATGCAGGCCCCTTTCAATCAGCATGGGAAATTCAATCAGATTCCTAAAGAACAGGATTGCCAAGTTACCTTTAACTGTGTCTGAATCAGAGGCAAAAGATGCTCTTTATTCAGATATAGATCGTTTCATTAATGAGAAGATAGTACTTGCAGACAAGGTGATAGTCAGACATGCTGCAACAAAGATCAGGGATGGAGATGTTCTTCTCACGTATGGTTTCTCATGTGTTGTCGAGATGACCATGTTATATGCTCATGAACTTGGGAGACAGTTCCGTGTTGTGGTAGTAGACTCACATCCAAAATTTGAAGGCCAAGCATTACTTCGTAGGCTGGTGGAAAAGGGCCTGAGTTGTTCATATACTCAGATAAATGCTGTTTCTTATATCATGCATGAAGTAACACGAGTTTTTCTGGGGGCTGCCTCTATATTTTCTAATGGAACTGTGTACTCAAGGGTTGGAACTGCTTGTGTTGCCATGGTTGCTCATGCATTTCGTGTTCCTGTGTTAATTTGTTGCGAAGCATATAAATTTCATGAAAGGGTACAGCTTGACTCCATTTGTTCAAATGAACTTGGTGACCCGGATGTTATTTCAAAGGTTGCAGGACGAGCAGATGTGAATTATTTGGATAATTGGCGTGACAAGGAAAATCTTCAACTTTTGAATTTAATCTATGATGCTACTCCGTCAGATTATGTCTCTATGATTATCACTGATTATGGCATGGTCCCACCCACAAGTGTGCCTGTCATTGTGCGTGAATACCGAGAGCATTTGTGGATATAA 1950 46.51 MEARRTSRIPIDPKVRQVGFFAPGALRDRSQSGPLGFSSSPPVSNISPTGNSLSPVMIPPPRHASDNFVLSRPLAVPVSDSTLRPPAVEDRMAVGSYDASELLLGTSASSRIGDGEFSEDYSVFFRRSSSGKFASSLPSGGFDSTAMKINPPAVVPAVKKYAAKKPAAVIEKSGGAVAEMQNELPTSSKPLKEKTTKAERRALQESQRAAKAAGKAGGNKPAAASGAATPMKEKASKAVKQVPSSVAASDKKGGERIPEKDKKKDVPPPRMQFDDKNRVEKAKRRAVVKPTEARNRVELFRHLPQYEHGTQLPKLESKFFQLDPVHPAVQKVGFQYLAGDIVGGNARCIAMLRAFQEAIKDYSMPPEKTLARDLTAKISSYVSFLNECRPLSISMGNSIRFLKNRIAKLPLTVSESEAKDALYSDIDRFINEKIVLADKVIVRHAATKIRDGDVLLTYGFSCVVEMTMLYAHELGRQFRVVVVDSHPKFEGQALLRRLVEKGLSCSYTQINAVSYIMHEVTRVFLGAASIFSNGTVYSRVGTACVAMVAHAFRVPVLICCEAYKFHERVQLDSICSNELGDPDVISKVAGRADVNYLDNWRDKENLQLLNLIYDATPSDYVSMIITDYGMVPPTSVPVIVREYREHLWI* 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 4483061 4492879 + Vvi17g370 Vvi17g370 779067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g370 649 Gene3D - 437 643 IPR042529 -
Vvi17g370 649 MobiDBLite consensus disorder prediction 32 53 - -
Vvi17g370 649 Pfam Initiation factor 2 subunit family 341 633 IPR000649 GO:0044237
Vvi17g370 649 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 1 649 - -
Vvi17g370 649 MobiDBLite consensus disorder prediction 172 284 - -
Vvi17g370 649 MobiDBLite consensus disorder prediction 23 59 - -
Vvi17g370 649 SUPERFAMILY NagB/RpiA/CoA transferase-like 326 643 IPR037171 -
Vvi17g370 649 MobiDBLite consensus disorder prediction 252 284 - -
Vvi17g370 649 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 649 - -
Vvi17g370 649 MobiDBLite consensus disorder prediction 190 206 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g921 Vvi17g370 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g370 K03680 - vvi:100243979 1222.22