Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g442 ATGTGGAGGCCGTTCTTCCAGCAATACCATCTCATCATCGTCCAAGATGGTGATCCTTCAAAGACCATCAGGGACTCTGCTTGTCGCTGCTTCGGTTACTTGGTTTCCAAGAAGAAGTACATCTACACTATTGATGACGATTGCTTCGTTGCTAAAGATCCATCTGGCAAAGACATTAATGCACTTGAGCAGCACATAAAGAACCTTCTGGCCCCATCCACCCCATTTTTCTTCAACACCCTGTATGATCCTTACCGTGATGGTGCAGATTTTGTCCGTGGATACCCATTTAGTCTCCGTGAGGGTGTCCCAACAGCTGTTTCTCATGGCCTCTGGCTTAACATCCCAGATTATGATGCCCCCACCCAGCTTGTCAAGCCGCGGGAGAGAAATACTAGGTATGTAGATGCCGTTATGACAATACCAAAGGGGACTCTTTTCCCCATGTGTGGTATGAATCTGGGTTTCAACCGAGAGTTGATTGGCCCTGCTATGTACTTTGGACTTATGGGTGATGGTCAGCCAATTGGACGCTACGATGATATGTGGGCTGGCTGGTGCACCAAGATCATATGTGACCACATGGGGTTGGGAATCAAGACAGGTCTGCCCTACATCTGGCACAGCAAAGCAAGCAACCCTTTTGTGAACCTTAAAAAGGAGTACAAAGGTATTTACTGGCAGGAGGAGCTGATCCCATTTTTCCAGTCTGTTATTCTTCCGAAGGAATGCACTACTGTTCAAAAATGCTACATTGAACTCTCCAAGCAAGTTAGGGCAAAGCTAGGGAAAGTTGATGAATACTTTATCAAGCTGGCTGATGCCATGGTCACATGGATTGAGGCATGGGATGAGCTCAACCCATCTGGAGCTTCTGCTGAAGTACGCAATGGTCCTGCAAAATAG 906 47.02 MWRPFFQQYHLIIVQDGDPSKTIRDSACRCFGYLVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLAPSTPFFFNTLYDPYRDGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAVMTIPKGTLFPMCGMNLGFNRELIGPAMYFGLMGDGQPIGRYDDMWAGWCTKIICDHMGLGIKTGLPYIWHSKASNPFVNLKKEYKGIYWQEELIPFFQSVILPKECTTVQKCYIELSKQVRAKLGKVDEYFIKLADAMVTWIEAWDELNPSGASAEVRNGPAK* 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 5513954 5516946 - Vvi17g442 Vvi17g442 779139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g442 301 PANTHER UDP-ARABINOSE MUTASE 1 24 IPR037595 -
Vvi17g442 301 PANTHER UDP-ARABINOSE MUTASE 23 293 IPR037595 -
Vvi17g442 301 Pfam Reversibly glycosylated polypeptide 23 287 IPR037595 -
Vvi17g442 301 PANTHER UDP-ARABINOPYRANOSE MUTASE 3 23 293 - -
Vvi17g442 301 PANTHER UDP-ARABINOPYRANOSE MUTASE 3 1 24 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g14 Vvi17g442 ECH
Vvi14g1000 Vvi17g442 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g442 K13379 - vvi:100246811 626.32