Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g446 ATGGAGTTTTTCTTCACATCCATTGCCAGATCCATCACCAAGCTCAGCAGTTACGCCATTTTGCTTGTGTTGTTGTTTTCTTGCTCCATTTTCACTTCTACAGAAGCCTACGATTCGCTTGATCCAGAGGGAAATATCACCATCAAGTGGGATGTAATGAGCTGGACTCCAGATGGTTATGTTGCTGTTGTTACAATGTTCAACTTCCAGCAATATCGCCACATTCAAGCACCAGGGTGGTCACTTGGATGGTCATGGGCCAAAAAGGAAGTAATCTGGAGTATGATGGGAGGACAAACAACAGAACAAGGGGATTGTTCAAGATTCAAAGGGAATGTACCACATTGCTGTAAAAAGGATCCAACAGTTGTGGATTTACTGCCAGGAACTCCTTACAACCAGCAGATTGCAAATTGCTGCAAAGGGGGTGTTATAAACTCATGGGTCCAGGACCCAGCTAATGCAGCAAGCTCATTCCAGGTCAGTGTGGGTGCAGCTGGGACTACCAACAAAACTGTCAAATTGCCAAAGAACTTCACGTTGAGAGCTCCAGGGCCTGGATATACTTGTGGGCCTGCCAAGATTGTAAAACCAACCAAGTTTACCACGGCGGATCAGAGGAGAGTCACTCAGGCTTTGATGACTTGGAATGTTACTTGCACGTATTCACAATTCCTGGCTCAGAAGACGCCTACATGTTGTGTCTCATTGTCATCGTTCTATAATAACACTATAGTATCCTGCCCAACTTGCACCTGTGGCTGTCAAAATAATCTAACTCATCCAGGGAGCTGTGTAGACCCAAACAATCCATATTTAGCTTCAGTCGTTGAAGGCTCAGGTAAAACCAGTTATCAGCCTCTCGTCCAGTGTACCAGCCATATGTGCCCAATCCGTGTCCATTGGCATGTTAAGCTCAACTACAAGGATTACTGGCGGGTGAAGATCACAATCACAAATTTCAATTACAGAATGAACTACACCCAATGGAATCTTGTTGTTCAACATCCCAACTTTGATAATCTCACACAGATTTTCAGTTTTAATTACAAGTCATTAACTCCTTATGCAGCCATAAATGACACTGCCATGTTATGGGGAGTCAAGTTTTACAATGATTTGCTCTCTCAAGCTGGTCCTCTTGGGAATGTGCAGTCAGAGCTACTATTTCGAAAGGATAAAGCAACTTTCACTTTTGATAAGGGATGGGCTTTCCCTCGAAGAATTTATTTCAATGGTGATAATTGCGTCATGCCTCCACCAGATGCCTACCCATGGTTGCCAAATGCCAGCTCCCGACCCACTGTCTCTCTCCTTTACTCAATCTTGACAATCTTGGCAGTTTCTGTCATTGTATTGGCTTATGCTTAG 1371 43.98 MEFFFTSIARSITKLSSYAILLVLLFSCSIFTSTEAYDSLDPEGNITIKWDVMSWTPDGYVAVVTMFNFQQYRHIQAPGWSLGWSWAKKEVIWSMMGGQTTEQGDCSRFKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVINSWVQDPANAASSFQVSVGAAGTTNKTVKLPKNFTLRAPGPGYTCGPAKIVKPTKFTTADQRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVSCPTCTCGCQNNLTHPGSCVDPNNPYLASVVEGSGKTSYQPLVQCTSHMCPIRVHWHVKLNYKDYWRVKITITNFNYRMNYTQWNLVVQHPNFDNLTQIFSFNYKSLTPYAAINDTAMLWGVKFYNDLLSQAGPLGNVQSELLFRKDKATFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSRPTVSLLYSILTILAVSVIVLAYA* 457
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 5544534 5548284 - Vvi17g446 Vvi17g446 779143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g446 456 PIRSF COBRA 8 456 IPR006918 GO:0010215|GO:0031225
Vvi17g446 456 PANTHER COBRA-LIKE PROTEIN 12 451 - -
Vvi17g446 456 PANTHER PROTEIN COBRA 12 451 IPR006918 GO:0010215|GO:0031225
Vvi17g446 456 Pfam COBRA-like protein 60 223 IPR006918 GO:0010215|GO:0031225
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g1006 Vvi17g446 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g446 - - vvi:100263971 967.992