Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi17g450 | ATGGTGGTTAGAGGACCCCCATCAGGGTCAAAACAGTCTTTACTAACTACGGTGAAAAAAATAGGAAGGAAAAACTCCATTTTAACCGAGGTTAATTTTTTAAGCTTTTCTTTTTTCGTTTTTTTGGAACTGTTCTTGTGTGTGGTTTTGTTCGTTGGCGTCTTTGGTTTCTGGCTTGTGCCTGGTGGTTTAGCTTGGGCTATGTCCAAGGCTAAAGCACGTAGCGCCATTCCTGGCCCTTCTGGGTTACCTCTGATAGGTCTTGTTTTCGCCTTCACTGGCTCTCTGACTCATAGGGTTCTGGCCAAGCTGGCTCGTGTTTCTGAAGCTGCGCCATTGATGGCTTTTTCGGTTGGCTTTACTCGTTTCATTATCTCCAGCCAACCGGAAACAGCCAAGGAGATTCTGAACAGTTCGGCGTTCGCGGACCGACCAGTGAAGGAGTCGGCTTATGAGCTTTTATTCCACCGAGCAATGGGTTTTGCTCCGTTCGGGGTGTACTGGAGAAATCTGAGGAGGATTTCGGCCACCCATTTGTTCAGTCCGAGGAGAATCGCTGGTTTCGGGGAGTTTCGGAGGACTATTGGGTTGAAAATGGTGGATGAGATTAGGGTTTTGATGGAGAAGAAAGGTGAGGTGAAGGTGAAGAAAGTGTTGCATTTTGGGTCTTTGAACAATGTGATGATGAGCGTGTTTGGAAGGAGCTACGACTTTGGAAAAGGTGTTTCTGGTGATGCGGTTGAGCTTGAGAGCCTGGTGAGTGAAGGGTACGAACTGCTTGGTATATTCAACTGGAGTGACCACTTACCGCTTCTCGGGTGGTTGGACTTGCAAGGAGTGAGAAAGAGATGCAAAAAGTTGGTTTCGAAGGTGAACGTTTTTGTTTCCAGGATCATAGATGAGCACAGGCTCAGGAGGGTTGGTGATGGAGAAGTGGGTCGTGATGGTGATGACAGTTCAGGCGATTTTGTTGACGTCTTACTCGATTTGGAAAAGGAAAGCAGGCTCAGCGACTCTGATATGATTGCTGTTTTATGGGAAATGATCTTTAGAGGGACTGACACGGTGGCAATTCTGTTGGAGTGGATTCTTGCAAGAATGGTTTTACACCCCGATATTCAATCCAAAGCCCAATCTGAAATAGATGCAGTGGTTGGAGCCACCCGACTGGTGTCTGATTCAGACATTCATAAACTCCCTTATCTCCATGCCATAGTAAAGGAAACTCTCCGCATGCATCCACCTGGCCCGCTCCTTTCCTGGGCACGCCTTTCCATTCATGATACCCACATTGGTTCGCACTTCATCCCTGTTGGCACCATTTGGCTCTGGAAGAAGGGTTTGTCCTGGGAAAGCAATGGGTTTAGCAACTGTGCAACTGTGGTTGGCTCAATTGCTCCAAAACTTCAAATGGGTTGCTTGTGA | 1425 | 47.37 | MVVRGPPSGSKQSLLTTVKKIGRKNSILTEVNFLSFSFFVFLELFLCVVLFVGVFGFWLVPGGLAWAMSKAKARSAIPGPSGLPLIGLVFAFTGSLTHRVLAKLARVSEAAPLMAFSVGFTRFIISSQPETAKEILNSSAFADRPVKESAYELLFHRAMGFAPFGVYWRNLRRISATHLFSPRRIAGFGEFRRTIGLKMVDEIRVLMEKKGEVKVKKVLHFGSLNNVMMSVFGRSYDFGKGVSGDAVELESLVSEGYELLGIFNWSDHLPLLGWLDLQGVRKRCKKLVSKVNVFVSRIIDEHRLRRVGDGEVGRDGDDSSGDFVDVLLDLEKESRLSDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQSKAQSEIDAVVGATRLVSDSDIHKLPYLHAIVKETLRMHPPGPLLSWARLSIHDTHIGSHFIPVGTIWLWKKGLSWESNGFSNCATVVGSIAPKLQMGCL* | 475 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 5600224 | 5602845 | - | Vvi17g450 | Vvi17g450 | 779147 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi17g450 | 474 | Gene3D | Cytochrome P450 | 65 | 445 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi17g450 | 474 | PANTHER | CYTOCHROME P450 78A5 | 37 | 441 | - | - | |
Vvi17g450 | 474 | SUPERFAMILY | Cytochrome P450 | 77 | 441 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi17g450 | 474 | PANTHER | STEROID 21-HYDROXYLASE-RELATED | 37 | 441 | - | - | |
Vvi17g450 | 474 | Pfam | Cytochrome P450 | 78 | 441 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi17g450 | 474 | PRINTS | E-class P450 group I signature | 222 | 240 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi17g450 | 474 | PRINTS | E-class P450 group I signature | 340 | 357 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi17g450 | 474 | PRINTS | E-class P450 group I signature | 360 | 386 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi17g450 | 474 | PRINTS | E-class P450 group I signature | 403 | 421 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Event-related genes

Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi17g450 | K20619 | - | vvi:100253660 | 720.694 |