Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g455 ATGCGTGCCTTTTCCTGTCAAGATATAGGTGAAGTTAGTAGGATCTTTTCGTGGTTTCTTGTAAAAGAAAGGTTCAAATTAGAAATCATGGGTCGTGGAGTCAGCAGTGGTGGGGGACAAAGTTCTCTGGGCTACCTTTTTGGAAGTGGAGAGGCTCCAAAACCTGCCACAAATAATGCTGAAGCTCCTCAAAATCAGGGACAGGTTGGAATTGCACCACCAGCGGGTGCACCACCAGCGGTTATTAATAAGCAGATTCCAGCGGGCGTCCAGGGTAACACTACAAACAACTATTTTCGAGCTGATGGCCAGAACACCGGCAACTTTATTACGGATCGGCCTTCAACAAAGGTCCATGCGGCGCCTGGCGGTGGGTCTTCCCTAGGTTACCTGTTTGGGGATGGCAGCAACTGA 414 49.28 MRAFSCQDIGEVSRIFSWFLVKERFKLEIMGRGVSSGGGQSSLGYLFGSGEAPKPATNNAEAPQNQGQVGIAPPAGAPPAVINKQIPAGVQGNTTNNYFRADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGDGSN* 138
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 5652104 5658572 - Vvi17g455 Vvi17g455 779152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g455 137 MobiDBLite consensus disorder prediction 45 82 - -
Vvi17g455 137 PANTHER PROTEIN SPIRAL1-LIKE 2 18 136 - -
Vvi17g455 137 PANTHER SPR1 18 136 IPR039613 GO:0043622
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g28 Vvi17g455 ECH
Vvi14g1022 Vvi17g455 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g455 K18635 - vvi:100265524 178.333