Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g464 ATGGTGAGGTGGCGGAGCAACTTGGCGCCGCTTCTACGTGGCTATTACGTTCTTCTCTACTTAAAACCATCTCGCTGCTCTCTCTCTTCTTCCTCACTCTCAATTTCTCTCTCATTTCTCCGGCTGAGGTCGAGGTTGTGGTCGGAATTCTTCTTCGAGTTGAATTCCGGCCAGGCTATATATGTTTGGAGGAAATCAGTATTAATTAGCCAAACCCTAACTCTAGAAGGAGACCAGCACAGGAGCTGCACTATCGTTCTGTTCTTTTCTATACCTTTTACCATGGATGACCCTGGCAAAAATGTTGCTCCTGAGTTTGAGATACCCGACCAAATTGAAGAAGAAGACTCAGACAATCTATCTGGAAACGGATCTGCAGAGGAGAAAGAGACAAATCCTAACATAGAGTTGTTTGCAGCCGACCGGAAAAGAAAGGCAGCTGCTACTGTTCAAGTCCTCGCTTATGGATTGAATTGTAGTGTTGAGGAGAAAAGGAAGAGGAAAGTCGTGCAGGCCCGGAAAAAACTGCTAGATCGTCCTGTTGGGTGGTCACCTTTTGGGTTGCCTGGTTGGGATAGTGCAAAGACACGCACTGACTCTCGTGCCATTATCAAAGACCTTGTCAAGACAATACCATTACCATATCAAGCCAAGGATAAGGCTGAAGTACGAGGAAGAAGAAATAAGGGAAAGCGTTCTATAGAAATCCCTCAAGGAGGAAAACTTAAGTCTGCAGCTTCAGTGGGAACATATGATCACTCTTCTCTTACGACTCGAGGAGCTCCAACACCTGTGCTGGACGTTCCTGTAGATGTTTCAACAGAAATAAGCTTTGCAGAATTCAATGAATTCTTTAGCCCTACCGAGTTCGCATGTGCTGAGACATTGGCTACTGTTGCAGAGGTTCCCATCTTATACAATCCAGAAGGTGCTGTTGCAGAGGATCCCATCTGTTACAATCAAGGAGGTGATTATGAAGAAGCACGCAATAGGCTTTCTGCTATCCTCTCACTGGATTTTGATCATTTACTGCTTGATCCTGACACCTTGGCCCGAACATTACATCTTTCAACTGCACTGAAGGAAAATGCTGGTTTCAATCCTTTTCAACTTGCAATGCTGAAGATGGTCGAGGAGATACCTTTGCTGAGTGATGACATAGTAGAATTCAAGGATTTAAACATGGAAATAAAAACACTGTTCTCTGAGCTAGAGTCCAACATCTTACGAGTTGCTTGCTCGTGGACAAAATACAGAGATTCGATTATAACATTGAGCGATCTGCAAGTCGATGTGAGTGCCAATCTATATGCTGCTAGGATGCTTGATCATCAGATTTTACAGCTTCAAACTCGTCGTGTGGAATTGGCTAATTTACTTGAGTCGAAGAAAAATGCAATGATAGAGTTGATTTCAGCTCAAACGAAAATTGCTGGTACTCTTCCCAAAACTTCTGATGATGAACAAGTTGAAGCTGCTGACCTAAAGAAGCCCGGAGGAAGCGCAAAGAAGAAACCAATAATTGATAATTGGGCCAAAATCTTGGATGGGTTTCGTTTCTCGTTTGGCTATGGTGATTTTCTTCTGACTACTCAGTTTTTTTCTGACAAGCGTTCTGATTGTTTCCATTTCAGAAGAACGCAAAACAAAGCTCTTTTTAGGGTTCTTGCCTACGACTCTAGCGTATCAATGGCTGGGACAAGCAAAGATGGCATGTATGGAATTCATGACTACTTCATGCAAAGCGACGAACGCCAGAAGAATGGTGCAGGAGATTCCGTTTCCGATTCCGGCTGCAATCTTGAACTGACTCTGGGAGGAAGCTACGGCGACTTTGACGACGAAATGCCAGTTCTAACTCTATCATCTTCTGTATTCGAAAGCGACACTATGGAGGAAGATTCCGGAGAACCCAATGTTCCCCCTCCGGCGGAGTTTGCGGTGGAGGGCTCATTTCTCTCGCTTGGGATGTCATTACCGCCACCGGTCCTGGAGATGAAGACGATGAAAGAACTACAGACAATGAGGAGACAGGAGGTGAAGAAAAGGCTGATGGGGAAAAACAGGAACAGAGGCAGACCTCCACTACCCAACCAAAGCCAAACTCGGGTTTTGTTGCCCGCAGTGTTTCAATTAGCTCCGCCTTCCAAGACAGTTCCACCGTCATCGCCACCTCTTCTTCAGCCTCTGTGTCCGACGCCAATGTCATTCCGGCTGCCAACGCCAATCTCACCTCCTCTAAAACCGTCGTCTCCACCTCTGTCTCCGACTCCGTTGTCATTTTACATGCCGCCACCACCACCAACTCCATCAACTTCATCTCCGCCTCTGTCACCGAGGCCACTGTCATTCCGCTTGCCAACGCCAACGCCACCACCACCACCGCCACCTCCTCCGCAGCATTCTTCTCTGCCTTTGTGCCCAATGCCATTGTCCATCCTACCGCCACATCGGCAGTCTTCTTCTCCCCCTCTCTCTCCAATTCCATTATCATTCCGACTGCCGTTGCCTGCACCCCACTCTCCGTCCGAATTATCCCCTTTGGTTTCTGATCCTGCTCCCCCTACTCTACTGCCTCCGGTTCCCACTCATCCCCATTTTCCAGCCAAAGGCGAGGGTCACAAAATGGCTATTCCAGTGGAACCAGAAAGTCTCCCAGTTGACATCCTAAGGGCTTTGGTAGTAAGATGGCTGCTGCAGCACAAATACAAAAGGCCTAGGGCTTCTGATAGAAGCGATCGGGAGACTGGTCTAGAGCTCATAAAACAAATGCCAACTGTGGTGACTACTGGTGCCGGGCCCAATGGGAAGAGGATCGAGGGGTTTCTCTATAAATTTGGAACAGGGCAAATCAGTCTCGTGTGTATTTGCCATGGCATGTTCTTCACTCCGGCCGAGTTCGTGAGGCATGCTGGTGGAGATGATGTGGAAAATCCCATGAAGCAGATTATCGTTTGTCCTGCGTCCTTTTAA 2973 47.19 MVRWRSNLAPLLRGYYVLLYLKPSRCSLSSSSLSISLSFLRLRSRLWSEFFFELNSGQAIYVWRKSVLISQTLTLEGDQHRSCTIVLFFSIPFTMDDPGKNVAPEFEIPDQIEEEDSDNLSGNGSAEEKETNPNIELFAADRKRKAAATVQVLAYGLNCSVEEKRKRKVVQARKKLLDRPVGWSPFGLPGWDSAKTRTDSRAIIKDLVKTIPLPYQAKDKAEVRGRRNKGKRSIEIPQGGKLKSAASVGTYDHSSLTTRGAPTPVLDVPVDVSTEISFAEFNEFFSPTEFACAETLATVAEVPILYNPEGAVAEDPICYNQGGDYEEARNRLSAILSLDFDHLLLDPDTLARTLHLSTALKENAGFNPFQLAMLKMVEEIPLLSDDIVEFKDLNMEIKTLFSELESNILRVACSWTKYRDSIITLSDLQVDVSANLYAARMLDHQILQLQTRRVELANLLESKKNAMIELISAQTKIAGTLPKTSDDEQVEAADLKKPGGSAKKKPIIDNWAKILDGFRFSFGYGDFLLTTQFFSDKRSDCFHFRRTQNKALFRVLAYDSSVSMAGTSKDGMYGIHDYFMQSDERQKNGAGDSVSDSGCNLELTLGGSYGDFDDEMPVLTLSSSVFESDTMEEDSGEPNVPPPAEFAVEGSFLSLGMSLPPPVLEMKTMKELQTMRRQEVKKRLMGKNRNRGRPPLPNQSQTRVLLPAVFQLAPPSKTVPPSSPPLLQPLCPTPMSFRLPTPISPPLKPSSPPLSPTPLSFYMPPPPPTPSTSSPPLSPRPLSFRLPTPTPPPPPPPPPQHSSLPLCPMPLSILPPHRQSSSPPLSPIPLSFRLPLPAPHSPSELSPLVSDPAPPTLLPPVPTHPHFPAKGEGHKMAIPVEPESLPVDILRALVVRWLLQHKYKRPRASDRSDRETGLELIKQMPTVVTTGAGPNGKRIEGFLYKFGTGQISLVCICHGMFFTPAEFVRHAGGDDVENPMKQIIVCPASF* 991
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 5760557 5770494 + Vvi17g464 Vvi17g464 779161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g464 990 MobiDBLite consensus disorder prediction 681 703 - -
Vvi17g464 990 MobiDBLite consensus disorder prediction 715 828 - -
Vvi17g464 990 MobiDBLite consensus disorder prediction 840 873 - -
Vvi17g464 990 PANTHER AFP HOMOLOG 2 564 987 IPR031307 GO:0007165
Vvi17g464 990 MobiDBLite consensus disorder prediction 840 866 - -
Vvi17g464 990 MobiDBLite consensus disorder prediction 219 247 - -
Vvi17g464 990 MobiDBLite consensus disorder prediction 717 812 - -
Vvi17g464 990 MobiDBLite consensus disorder prediction 219 236 - -
Vvi17g464 990 Pfam Tify domain binding domain 953 984 IPR032308 -
Vvi17g464 990 MobiDBLite consensus disorder prediction 114 134 - -
Vvi17g464 990 PANTHER NINJA-FAMILY PROTEIN AFP1 564 987 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g1029 Vvi17g464 ECH
Vvi1g33 Vvi17g464 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g464 - - vvi:100265622 823.928