Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g482 ATGTTGAGCAGCAAATGGATTACTACAGTGGCAAGCATATGGATCCAGTGCACCTGCGGCGGATCCTACGCCTTCGGCGTCTACTCATCGGTTCTCAAATCTAGCCAAAGTTACGACCAAGCAACGCTCGATACCGTCTCCGTGTTCAAAGACATCGGAGCCAACGCCGGTGTCCTCTCCGGCCTCCTCTACTCCGCCGCCTCTTCCGTTTCTTATCTCCTCAGTTTTGGTGGACCGTGGGTGGTCCACGTGGCAGGGGCGATTCAGTGCTTTGCTGGCTATTTTCTTATATGGCTGTCCGTCACTGGAGTCATTCATCGGCCTGCAGTGCCGCTGATGTGCTTGTTCATGTTCATCGCCGCTCACGCTCAGACCTTCTTCAACACTGCTAATGTCGTCACCGCCGTTCAGAACTTCCCGGATTATGGCGGCACCATCGTCGGTATCATGAAGGGCTTTCTTGGTCTGAGTGGGGCAGTGTTAATCCAAGTGTACGATGCATTATTCGAAGGCAATCCGAGCATTTTCATTCTGATGCTTGCGTTGCTGCCGACTTTCATCTCCCTCTTGCTGATGTGTTTGGTTAGAATCGATGAAAGAGACACACAAGGCAACAAGAAGCAGTTGAATCGTTTCTCCACTGTCGCTCTCCTTGTTGCTGCTTATCTTATGATCGTGATAATCTTGGAGAACATCTTTACTTTTCCGTTATGGGCACGCATCGCTACTCTCATACTTCTTTTGCTTCTGCTGGCTTCCCCTCTTGGAATCGCAGCCAATGCCCTTAAGGATGAATCAGAGATATCATCACAAGGGTTGGTGTCCTCCGAGAGGAGCCCATTGCTGAGGGATCCTAAAGAACATCATGCAGCAGACGAAGACACCCCAATGCTGCAGGATGAGGAAGACCTGAATGTTGTGCAAGCCATGCGGACTGGAAACTTCTGGTTGTTGTTCATAGCCATGGCATGTGGAATGGGGTCCGGGCTGGCTACAATAAATAACATCAGCCAAATAGGAGAATCTCTTGGTTACACTACAGTTGAGATAAACACTCTGGTTTCTTTGTGGAGTATATGGAATTTTCTTGGCCGTTTTGGAGCTGGATATGTATCGGATATTCTGCTGCATAGAAGAGGCTGGGCAAGGCCATTGTTGATGGTCATCACCCTGGCTACCATGACTATTGGCCATGTGATCATTGCCTCTGGTTTTGCGGGGAATTTGTATGTGGGTTCAGTAATAGTAGGGGTTTGTTATGGTTCACAGTGGTCATTGATGCCCACCATCACTTCCGAGCTATTTGGTGTTGGGCACATGGGTACCATCTTCAACACCATTGCCATAGCCAGTCCTGTTGGCTCTTACCTTCTCTCTGTTAGAGTAATCGGGTACATCTATGACAAGGAAGCATCAGGCAAGCAGAACTCATGCTCCGGCACTCATTGTTTCATGTTATCATTTCTGATCATCGGATGTGTTACTCTTTTTGGGTCACTCGTTGCTTCTGCATTGTTCTTCCGAACAAAGAGGTTCTATAAGTTGGTTGTACTTAGAAGGCTAAACCTTTCTCTGCAAGACGATGACAGGTATTGTTGCTTCCTCTGTTTTTCTGAGGGAAGACACGAAAACAAATGTAATTCTTATTCCATCATCTTGATAATTTCCCAGGAGTTTCAATTCCTTGGTTCTGATTCAGAATTGACACATGCCTCCTCTTTCTTATTATTAAAACCAAGCTGCCTATTACTTTATATATTTGCTGGAATGATGGAATCCAATAGAAAATCCACCCCCCACCCCAAAAAAAAAAAAAGAGAATTGGACAAAAGTGGATGA 1839 46.6 MLSSKWITTVASIWIQCTCGGSYAFGVYSSVLKSSQSYDQATLDTVSVFKDIGANAGVLSGLLYSAASSVSYLLSFGGPWVVHVAGAIQCFAGYFLIWLSVTGVIHRPAVPLMCLFMFIAAHAQTFFNTANVVTAVQNFPDYGGTIVGIMKGFLGLSGAVLIQVYDALFEGNPSIFILMLALLPTFISLLLMCLVRIDERDTQGNKKQLNRFSTVALLVAAYLMIVIILENIFTFPLWARIATLILLLLLLASPLGIAANALKDESEISSQGLVSSERSPLLRDPKEHHAADEDTPMLQDEEDLNVVQAMRTGNFWLLFIAMACGMGSGLATINNISQIGESLGYTTVEINTLVSLWSIWNFLGRFGAGYVSDILLHRRGWARPLLMVITLATMTIGHVIIASGFAGNLYVGSVIVGVCYGSQWSLMPTITSELFGVGHMGTIFNTIAIASPVGSYLLSVRVIGYIYDKEASGKQNSCSGTHCFMLSFLIIGCVTLFGSLVASALFFRTKRFYKLVVLRRLNLSLQDDDRYCCFLCFSEGRHENKCNSYSIILIISQEFQFLGSDSELTHASSFLLLKPSCLLLYIFAGMMESNRKSTPHPKKKKRELDKSG* 613
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 5958855 5961585 - Vvi17g482 Vvi17g482 779179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g482 612 MobiDBLite consensus disorder prediction 273 295 - -
Vvi17g482 612 PANTHER F25A4.25 PROTEIN 2 524 - -
Vvi17g482 612 Gene3D MFS general substrate transporter like domains 282 537 IPR036259 -
Vvi17g482 612 Pfam Major Facilitator Superfamily 317 511 IPR011701 GO:0022857|GO:0055085
Vvi17g482 612 SUPERFAMILY MFS general substrate transporter 6 200 IPR036259 -
Vvi17g482 612 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 524 - -
Vvi17g482 612 MobiDBLite consensus disorder prediction 280 295 - -
Vvi17g482 612 Pfam Nodulin-like 5 257 IPR010658 -
Vvi17g482 612 CDD MFS_Mch1p_like 4 498 - -
Vvi17g482 612 SUPERFAMILY MFS general substrate transporter 215 511 IPR036259 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g482 - - vvi:100244916 978.393