Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi17g546 | ATGGGAGAGGAAAACAAAGTGACGTTATATGGAATGTGGGCTAGTCCTTTCGTCAAGAGGGTTGAAATTGCCCTCAAAATTAAAGGCATACCTTATGAGTATGTAGAAGAAGATTTGAGAAACAAAAGCCAGTTGCTCCTCCAGTACAATCCTGTCCACAAGAAGGTTCCTGTACTTGTCCACAATGGAAAACCCATTACTGAATCATTGGTCATCCTTGAATATATTGAAGAAACCTGGAAGAATGGTCCTAAACTTCTTCCTGAGGATCCCTATGAAAGGGCCAAAGTTCGCTTCTGGGCTAGCTTTATCCAGCAACAGTTTGTTGATAGCATGGTCTCAGCAGCAAAAAGCAGTGGGGAAGCGCATGAGAAAGCCATGAAGGAAGCGTTTGAGAAAATGACTGTTTTTGAAGAGGGAATGAAGGACTTCTTTCCAAGTGGCACTCCTCATTTTGAAGATGAGAATATTGGTTTCCTGGACATTGTATTGTGTTCGCTGTTTGGCCCCCACAAAGCTCAAGAAGAAGCCCTTGGTCTGAAGATCATTGATCCAGAAAGGCATCCACTGCATGACCTCGAGATTCAAGCATCACATTTGAGAGAGATGGAAGAGGAAAACCAAATTAAGCTACATGGAATGTGGGGTAGCACTTTCACTAAGAGGGTAGAGCTAGCCCTCAAAATTAAGGGCATACCCTATGAGTATATTGAAGAAGATTTGAGCAACAAGAGCCAATTGGTCCTCAAGTACAATCCTGTTCACAAGAAGGTTCCTGTCCTTGTGCACAATGGAAAACCCATCATTGAGTCTCTCATCATTCTTGAATATATCGATGAAACCTGGAAGAATGCTCCCCGGTTGCTGCCTGATGATCCCTATGAAAGAGCTAAAGTTCGCTTCTGGGCCAGTTTTTTCCATCAACAGTTGTTTGAGGATATGGGTCGAGTAATCACATCTGATGGAGAAGCACAAGAGAAAGCCACAAAGGACTTGTTTGAGAAGCTGACAGTTTTGGAAGAGGGAATGAAGGATTTCTTTCCAGGGGGCACTCCTTCCATTAATGGTGAAAACATGGGACTCCTGGACATTCTAATGTGTGCATTATTTGGTCCGTACAAAGCTCATGAAGAAGTCCTGGGAATGAAGATGATCGACCCAGAAAGGAACCCACTGTTATTCTCATGGGTGATGGCTATAACGGAGATACCTGTGGTGCAAGAGTCAACCCCTCCTCATGAGAAACTCGTGGGCCTTGTTCAGTTTATCAGACAGCATGCTCTTCAGTCCTGTGTGGCTTGA | 1302 | 43.93 | MGEENKVTLYGMWASPFVKRVEIALKIKGIPYEYVEEDLRNKSQLLLQYNPVHKKVPVLVHNGKPITESLVILEYIEETWKNGPKLLPEDPYERAKVRFWASFIQQQFVDSMVSAAKSSGEAHEKAMKEAFEKMTVFEEGMKDFFPSGTPHFEDENIGFLDIVLCSLFGPHKAQEEALGLKIIDPERHPLHDLEIQASHLREMEEENQIKLHGMWGSTFTKRVELALKIKGIPYEYIEEDLSNKSQLVLKYNPVHKKVPVLVHNGKPIIESLIILEYIDETWKNAPRLLPDDPYERAKVRFWASFFHQQLFEDMGRVITSDGEAQEKATKDLFEKLTVLEEGMKDFFPGGTPSINGENMGLLDILMCALFGPYKAHEEVLGMKMIDPERNPLLFSWVMAITEIPVVQESTPPHEKLVGLVQFIRQHALQSCVA* | 434 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 6686592 | 6693719 | + | Vvi17g546 | Vvi17g546 | 779243 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi17g546 | 433 | CDD | GST_C_Tau | 91 | 190 | IPR045074 | GO:0004364|GO:0006749 | |
Vvi17g546 | 433 | CDD | GST_N_Tau | 209 | 282 | - | - | |
Vvi17g546 | 433 | SFLD | Glutathione Transferase (cytosolic) | 4 | 189 | IPR040079 | - | |
Vvi17g546 | 433 | SFLD | Glutathione Transferase (cytosolic) | 205 | 428 | IPR040079 | - | |
Vvi17g546 | 433 | SFLD | Main.3: Omega- and Tau-like | 205 | 428 | IPR045073 | - | |
Vvi17g546 | 433 | SFLD | Main.3: Omega- and Tau-like | 4 | 189 | IPR045073 | - | |
Vvi17g546 | 433 | Gene3D | Glutaredoxin | 1 | 86 | - | - | |
Vvi17g546 | 433 | Gene3D | Glutaredoxin | 205 | 288 | - | - | |
Vvi17g546 | 433 | CDD | GST_C_Tau | 293 | 423 | IPR045074 | GO:0004364|GO:0006749 | |
Vvi17g546 | 433 | SUPERFAMILY | Thioredoxin-like | 208 | 310 | IPR036249 | - | |
Vvi17g546 | 433 | SUPERFAMILY | GST C-terminal domain-like | 280 | 425 | IPR036282 | - | |
Vvi17g546 | 433 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 5 | 84 | IPR004045 | - | |
Vvi17g546 | 433 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 207 | 286 | IPR004045 | - | |
Vvi17g546 | 433 | CDD | GST_N_Tau | 7 | 80 | - | - | |
Vvi17g546 | 433 | Gene3D | - | 289 | 431 | - | - | |
Vvi17g546 | 433 | Gene3D | - | 87 | 204 | - | - | |
Vvi17g546 | 433 | ProSiteProfiles | Glutaredoxin domain profile. | 1 | 94 | - | - | |
Vvi17g546 | 433 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 203 | 427 | IPR045073 | - | |
Vvi17g546 | 433 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 1 | 190 | IPR045073 | - | |
Vvi17g546 | 433 | PANTHER | S-TRANSFERASE, PUTATIVE-RELATED | 1 | 190 | - | - | |
Vvi17g546 | 433 | PANTHER | S-TRANSFERASE, PUTATIVE-RELATED | 203 | 427 | - | - | |
Vvi17g546 | 433 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 292 | 430 | IPR010987 | - | |
Vvi17g546 | 433 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 90 | 229 | IPR010987 | - | |
Vvi17g546 | 433 | SUPERFAMILY | GST C-terminal domain-like | 78 | 185 | IPR036282 | - | |
Vvi17g546 | 433 | Pfam | Glutathione S-transferase, N-terminal domain | 6 | 77 | IPR004045 | - | |
Vvi17g546 | 433 | Pfam | Glutathione S-transferase, N-terminal domain | 208 | 280 | IPR004045 | - | |
Vvi17g546 | 433 | SUPERFAMILY | Thioredoxin-like | 5 | 108 | IPR036249 | - |
Event-related genes

Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi17g546 | K00799 | - | vvi:100250043 | 472.626 |