Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g575 ATGAGGTTGAGAAGAAACACAGATGATGAACAATTGAGGCTGTCGGATCCGGAACATCACACTGTTTCTCGACCCTTGGATAGGGAATGTGAGCAGAATCCAATGAGATTGATGGGGATCTTGGTCGTTTGCTTGATGGTTGTTTCAGTTCTGTTTTCAGTGTCTGTGGTCCTTAGAGACCCACCATCTGATGGAGTTTGGGCTAGTGAAGAAACTAAGTTTCTTCAAGTAAATCCTAGGAAAGATGCAGAAGATAATCTCTCATGGTCAGCCGAGGAACCTAAAGATAAACTGCTTGGCGGCCTTCTTGATGCTGGATTCAATGAAAGATCTTGTCTCAGCAGGTACCAATCAGCCTTATATCGCAAAGAACTACTGCATAAACCTTCTTCTTACCTCCTCTCTAAGTTACGGAGTTATGAAGCTCTTCATAAACGATGTGGACCCTATACAGAATCCTACAACCGTACCTTGAAACAACTCCAGTTGGGCCAACATATGGAGCAATCAGATTGCAACTATTTGGTATGGATATCATTCAGTGGCTTAGGCAACAGGATACTAACTCTAGCTTCGGCATTTCTTTATGCTATCCTCACAAACAGGGTCCTACTTGTTGATCCTGGAGCTGACATGCCTGATCTCTTCTGTGAACCTTTTCCCGAGGTTTCCTGGTTACTCCCCTTGGACTTTCCCCTTAAAAATGAGTTTAACAGCTTTGATCAGAAATCCCCATTTTGTTATGGGAAAATGCTCAAGAATAAGACTTTGACAGATTCTAGTTGGTCGATCCTGCCACCTTATGTGTATCTCCATCTAGTCCATGATTATGATGATCACGATAAGATGTTCTTCTGCAATCAAGATCAATCTTTTCTCCGAAAAATCCCTTGTTTAATTATCAAAACTGATAACTACTTTGTTCCATCTCTCTTCTTGATCCCTTCATTTGAGCAAGAACTCATCTTTGACACTGGGATTGGTCCATTCCAACATGTATTAGATCAGATCATAGCTTGTACCATGACAGAGAATTTGCTGCCAGAAATCAACATGAGGGAACCTGTCGTTAGTTCATATGGACATAAGAAGTCTAAAGCTGTACTCATGACATCTTTGAGCGCTGGATACTTTGAGAAAGTAAGGAACATGTATTGGGAACACCCAACTGTGACAGGGGAAGTGATAGGCGTTTATCAACCAAGTCATGAAGAATATCAACAAACTGAGAAGCAGAATCACAACAGGAAGGCATGGGCAGAAATGTATCTACTGAGCTTGACTGATGTGTTGGTCACTAGTTCATGGTCAACTTTTGGGTATGTGGCTCAGGGCCTTGGAGGATTAAAACCTTGGATTCTCTACAAGCCTGAAAATCAGACTGCCCCAGATCCACCTTGTCGCCGAGCCATGTCAATGGAGCCTTGTTTCCACGCCCCTCCCTTCTATGACTGCAAGGCAAAGAAGGGGGTTGACACAGGCGCACTTGTTCCTCACGTGAGGCATTGTGAGGACATGAGCTGGGGTCTCAAACTGGTTGATGACAGCCAGGAACATGGGGTTGTGAGGACATGA 1575 43.56 MRLRRNTDDEQLRLSDPEHHTVSRPLDRECEQNPMRLMGILVVCLMVVSVLFSVSVVLRDPPSDGVWASEETKFLQVNPRKDAEDNLSWSAEEPKDKLLGGLLDAGFNERSCLSRYQSALYRKELLHKPSSYLLSKLRSYEALHKRCGPYTESYNRTLKQLQLGQHMEQSDCNYLVWISFSGLGNRILTLASAFLYAILTNRVLLVDPGADMPDLFCEPFPEVSWLLPLDFPLKNEFNSFDQKSPFCYGKMLKNKTLTDSSWSILPPYVYLHLVHDYDDHDKMFFCNQDQSFLRKIPCLIIKTDNYFVPSLFLIPSFEQELIFDTGIGPFQHVLDQIIACTMTENLLPEINMREPVVSSYGHKKSKAVLMTSLSAGYFEKVRNMYWEHPTVTGEVIGVYQPSHEEYQQTEKQNHNRKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENQTAPDPPCRRAMSMEPCFHAPPFYDCKAKKGVDTGALVPHVRHCEDMSWGLKLVDDSQEHGVVRT* 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 7027584 7031512 - Vvi17g575 Vvi17g575 779272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g575 524 MobiDBLite consensus disorder prediction 1 24 - -
Vvi17g575 524 Pfam Xyloglucan fucosyltransferase 88 321 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vvi17g575 524 Pfam Xyloglucan fucosyltransferase 322 486 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vvi17g575 524 PANTHER 2-ALPHA-L-FUCOSYLTRANSFERASE, PUTATIVE-RELATED 322 516 - -
Vvi17g575 524 PANTHER 2-ALPHA-L-FUCOSYLTRANSFERASE, PUTATIVE-RELATED 2 321 - -
Vvi17g575 524 Gene3D - 169 222 - -
Vvi17g575 524 PANTHER FUCOSYLTRANSFERASE 2-RELATED 2 321 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vvi17g575 524 PANTHER FUCOSYLTRANSFERASE 2-RELATED 322 516 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g967 Vvi17g575 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g575 K13681 - vvi:100262032 1021.54