Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi17g577 | ATGGAACATGGGGGTTTTGAAGAAGGAGGTGAGATTAGGGTTTATCATTATATTCCCAGATTGATCGCTGGCGCCCTTTCCGGCGCTCTCACCGGTGTTTTTGCTCTCGCTGGTGCTTTCACGGGGGCTATCACTGGTGCTATAGCAGGTAGAGCTTCTGACAGTGGTGTCCTCCGTGGAGCTGGACTTGGTGCCATTGCTGGGGCTGTTTTGTCTGTTGAGGTTTTGGAGGCTTCCCGTGCTTACTGGTGTTCAGACCGATCCAACTCACAGAACTCCTTATCTATTACAGATTTCATAGAGGAGCTTCTCCGTGGGAGAATTGTAGAGGAATCGTTCACACCAGCAGTGTTAACTACTTACCGATGGCAGGTTAGCATTGGTAACTTAAGCTATGATGAGATGTATGATGTCTATGGTGAAGTTGCATCCAGGGGTCTGTCAGGGGACTCACTGAAGAAACTACCATGCCATGTAATCTTGGATGAAATTAAGGCAGCACAGAGCAACTGCTGCACAATATGTTTGCAGGATATTGAAGTTGGGGAAATTGCAAGGAGCTTGCCTTGGTGCCATCACACATTTCACTTGGCATGTGTGGACAAGTGGCTTATAAGACATGGCACGTGCCCTGTGTGCAGGCGCAATGTTTGA | 654 | 48.32 | MEHGGFEEGGEIRVYHYIPRLIAGALSGALTGVFALAGAFTGAITGAIAGRASDSGVLRGAGLGAIAGAVLSVEVLEASRAYWCSDRSNSQNSLSITDFIEELLRGRIVEESFTPAVLTTYRWQVSIGNLSYDEMYDVYGEVASRGLSGDSLKKLPCHVILDEIKAAQSNCCTICLQDIEVGEIARSLPWCHHTFHLACVDKWLIRHGTCPVCRRNV* | 218 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 7045792 | 7050331 | - | Vvi17g577 | Vvi17g577 | 779274 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi17g577 | 217 | PANTHER | NEP1-INTERACTING PROTEIN-LIKE 2 | 7 | 216 | IPR044523 | - | |
Vvi17g577 | 217 | PANTHER | NEP1-INTERACTING PROTEIN-LIKE 2 | 7 | 216 | - | - | |
Vvi17g577 | 217 | ProSiteProfiles | Zinc finger RING-type profile. | 172 | 214 | IPR001841 | - | |
Vvi17g577 | 217 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 134 | 217 | IPR013083 | - | |
Vvi17g577 | 217 | CDD | RING-H2_PA-TM-RING | 171 | 214 | - | - | |
Vvi17g577 | 217 | SUPERFAMILY | RING/U-box | 160 | 217 | - | - | |
Vvi17g577 | 217 | Pfam | Ring finger domain | 171 | 214 | IPR001841 | - | |
Vvi17g577 | 217 | SMART | ring_2 | 172 | 213 | IPR001841 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi17g577 | - | - | vvi:100245106 | 408.683 |