Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g644 ATGCTCCGCAAGATTTGCTCCGTCCACCTCTTCTCCGGCAAAGCCTTGGATGATTTTCGCCATATCCGACAGGAGGAGGTTGCGGTGCTAACGCGCGCACTTGCGAGGGCGGGTCAAACGCCGGTGAACTTGGGGCAGCTGCTGAACGTGTGTACTACCAACGCCCTAGGGCGGGTGATGTTAGGCAGGAGAGTGTTCGGCGACGGCAGTGGAGGCGAAGATCCGAAGGCCGACGAGTTCAAAGAGATGGTGGTGGAGCTGATGGTCCTGGCCGGAGTTTTCAACATCGGCGACTTTGTGCCGGCGCTGGAATGGCTGGACCTGCAGGGCGTGGCTGCCAAGATGAAGAAGCTCCATGCTCGGTTTGACGCTTTCCTGGGCGCCATCGTGGAGGAGCACAAGATCAGCGGCTCTGCTGGTTCCGAGCGTCACGTGGACTTACTCAGCACGTTGATCTCGGTGAGGGATAATGCCGACGGTGAGGGAGGCAAGCTCACCGACGTTGAGATCAAAGCCTTGCTCTTGAACTTGTTCACAGCTGGAACTGACACCTCATCCAGCACAGTAGAGTGGGCCATTGCAGAGCTCATTCGCCACCCTGAAATGATGGCCCAAGCCCAACAAGAGCTGGACGCAGTGGTGGGCCGAAGCAGGCTTGTAACTGATTTGGACCTGCCCCAACTCACCTATGTCCAAGCCATAATCAAGGAAACCTTCCGCCTGCACCCATCCACGCCCCTCTCCCTCCCTCGGATGGCGGCGGAGAGCTGTGAGATCAACGGCTACCACATCCCCAAAAACGCCACTCTTCTAGTGAACGTGTGGGCCATAGCGCGGGACCCAGAGGTGTGGGAGGAGCCACTAGAATTCAGGCCCAACAGGTTCCTCCCAGGAGGGGAAAGACCAAATGCGGACGTGAGAGGGAATGATTTTGAAGTGATTCCATTCGGGGCTGGCCGGAGAATATGCGCGGGGATGAGCTTGGGACTGAGGATGGTGCACCTGTTAACCGCGACGCTTGTTCATGCGTTCAACTGGGAGTTGCCGGAAGGCCAGGTGGCGGAGAAGCTGAACATGGATGAGGCATATGGGCTGACCCTACAACGAGCCGCCCCACTCATGGTGCACCCACGGCCAAGGCTGTCACCCCAAGTTTTCGGGAAGCATCACAATCTAAAGAGTCGTGCAATGCGGCGAGTGAATATGACCAATAAAAGCACGAAAACTGAACGGGAGTCGCTTCATCTGTCCTGCATTCATTTACATTCTTTGCCCCATTGGTTAAGAATCCGTCCTGTTCTAGGAAAATTTTTCCCATCATTTCGAATGTCTTCCCATTTAAATATGAAATTTTGA 1356 55.53 MLRKICSVHLFSGKALDDFRHIRQEEVAVLTRALARAGQTPVNLGQLLNVCTTNALGRVMLGRRVFGDGSGGEDPKADEFKEMVVELMVLAGVFNIGDFVPALEWLDLQGVAAKMKKLHARFDAFLGAIVEEHKISGSAGSERHVDLLSTLISVRDNADGEGGKLTDVEIKALLLNLFTAGTDTSSSTVEWAIAELIRHPEMMAQAQQELDAVVGRSRLVTDLDLPQLTYVQAIIKETFRLHPSTPLSLPRMAAESCEINGYHIPKNATLLVNVWAIARDPEVWEEPLEFRPNRFLPGGERPNADVRGNDFEVIPFGAGRRICAGMSLGLRMVHLLTATLVHAFNWELPEGQVAEKLNMDEAYGLTLQRAAPLMVHPRPRLSPQVFGKHHNLKSRAMRRVNMTNKSTKTERESLHLSCIHLHSLPHWLRIRPVLGKFFPSFRMSSHLNMKF* 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 8011742 8034743 + Vvi17g644 Vvi17g644 779341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g644 451 PRINTS P450 superfamily signature 180 197 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g644 451 PRINTS P450 superfamily signature 233 244 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g644 451 PRINTS P450 superfamily signature 314 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g644 451 PRINTS P450 superfamily signature 323 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g644 451 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 378 - -
Vvi17g644 451 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 316 325 IPR017972 GO:0005506|GO:0016705
Vvi17g644 451 Gene3D Cytochrome P450 1 384 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g644 451 Pfam Cytochrome P450 2 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g644 451 PANTHER FLAVONOID 3'-MONOOXYGENASE 1 378 - -
Vvi17g644 451 SUPERFAMILY Cytochrome P450 2 380 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g644 451 PRINTS E-class P450 group I signature 51 69 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g644 451 PRINTS E-class P450 group I signature 169 186 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g644 451 PRINTS E-class P450 group I signature 189 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g644 451 PRINTS E-class P450 group I signature 232 250 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g644 451 PRINTS E-class P450 group I signature 273 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g644 451 PRINTS E-class P450 group I signature 313 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g644 451 PRINTS E-class P450 group I signature 323 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g644 K05280 - vvi:100232999 764.607