Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g649 ATGGCTGCTTTAGTCTACATGGTGCTCATTTTGGCCATGGCTGGTCATTCAAGTGCTAATTGGTGTGTTTGCAAAGATGGGCTTAGCGATGCTGTCCTGCAGAAAACATTGGACTATGCATGTGGAGCTGGGGCAGACTGTGGCCCTATCCATCAAAATGGTGGTTGTTACAACCCCAACACTGTAAGAGCTCATTGTTCATATGCTGTCAACAGCTATTTCCAAAAGAAAGGTCAGGCTCAAGGAACCTGTGATTTTGCTGGCACTGCCTCTGTTGCTACATCTGATCCAAGCGCTTCTGGTTGTGTCTATCCTTCTAGCATCAGCTCTGCGGGCACCAGTACAACCCCTTCCACGACAACTCCCTCAACCACACCATCAACCACAACGCCCTCAACCACGCCATCCACTACAACACCCTCAACTACAACACCCTCAACCACTTCACCTTACACTGGGACACCTTCTACTGGGGTATATGGCGGCATTAACAGTGGTGTTGGCCCATCAGGAGCTGGCATCAACACAGACATCAGTCATGGTGGGTTTATGCTTCAAAATACTTGCATGTTCTCTTTCTTTATAACCCTCTGGTTTTCAGGCTTGATGCTTTTGTGGGGTTGA 624 48.4 MAALVYMVLILAMAGHSSANWCVCKDGLSDAVLQKTLDYACGAGADCGPIHQNGGCYNPNTVRAHCSYAVNSYFQKKGQAQGTCDFAGTASVATSDPSASGCVYPSSISSAGTSTTPSTTTPSTTPSTTTPSTTPSTTTPSTTTPSTTSPYTGTPSTGVYGGINSGVGPSGAGINTDISHGGFMLQNTCMFSFFITLWFSGLMLLWG* 208
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 8111067 8115895 + Vvi17g649 Vvi17g649 779346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g649 207 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 3-LIKE ISOFORM X1 1 202 - -
Vvi17g649 207 MobiDBLite consensus disorder prediction 108 162 - -
Vvi17g649 207 Pfam X8 domain 21 91 IPR012946 -
Vvi17g649 207 PANTHER BETA-1,3 GLUCANASE 1 202 IPR044788 -
Vvi17g649 207 Gene3D - 15 121 - -
Vvi17g649 207 SMART X8_cls 20 104 IPR012946 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g46 Vvi17g649 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g649 - - vvi:100241539 357.836