Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g677 ATGAACACTTTGAAAAACACTGCCATAAGTTCTAGAAATCGGCTAGGGAGGACAAGAATCATGCTCATGGGATTTAGTCTCATCTACTTGAAGACAAACTATTTACTAATTGAGCTGTATTCAATGAATGGTAGGAAAGCCCTGGGAGAGTTGGACAACCCCAACCAGCCACAACCACCTTCATTGAAACGTTCAGCAACCAAAATTCAAAACACAGAGGGCAGAAGAATTTTACTTCCATTGCAGCCAAAACCAACCAATTTCTTCTACTCTCTCTGTGATTCTATCTTTTCAGAGTTCATGGGTGTGAAGGGTCATCCATGGATTCTTCCCTCTCTCTTGTGTTTCTCTCTTCTTTGTCTCCCTTGTTTCTCTCAACCAAGTTCTTCACCTGCAAGTTCCATCCCCAGTTCTCCTAATAATTCTCCAATCTCTCCACAAATTCCAGGAGCAGCATCACATGGAAAAGTTGGTGAGGTAGCTGGAGCAACAGCTGCAAGTGCTGTTGTTGTTGCTGGGGTGTTCTTCTGCTTCAGAAAATTTGTTGCTCGTCAACGTCAGAGAGATAAAAATGAATCGAGTTTTCGTCGTGAAGAAGCTGAGGTGATGCATGAGGAATTCAAGCATCGTGGAACTCTGAAAGGATTGATTGTTGATGATAATGGAGTGGAGGTTCTCTATCTGAGGAAACTTGAAGGTGGGCAATTGAGGAATAGTTTCTCTAAGGTTTTGAATAATCCTAATGAAGAAGAAAGAGGAAAGATAGTGGAGAGTATGGTAGATAGACCCAGAAAATCAAAGAGAATTCAAGAGATCCCATTTCTTCATGAGTCATCAGATGTGATTATCCTAGAGAAAGAGGCCAAACCAGTTTTGAAAGTTCCAACTCTACAGCCTCAGGTTTCTGTACCATCTCCTCCTCCACCTCCACCACCAGTACCCTCTCAGCCACTTCCACCGCCTCCACAGGTGATTCCAATAAAGAAAACTCCCAACCCACATTCTCCACCACTCCCTCCTAACAAGAAAATCCCCGGACCGCCTCCTCCTCCACCACCTCCTCCTGAAAGGAAAATCCCTGGACCACCTCCTCTGCCACCAATCCCAACAAGGAGGAAGCCTGCAGCACCACCTCCACCACCTAAGGCAGGTGGTTTGGTTTCAGCTTTGAAACCTCCACCTGTACCAAGGGGGAAGATGAACAGTAATAACAGGGCAGAGGCATCAACTGAAGGAAGCTCCAAGGGAACTGATTTTGGGCAGATGAAGCTGAAGCCATTGCACTGGGATAAGGTCATAGCTAATGTTGATCATTCAATTGTGTGGGATGAGATCAATGATGGATCCTTCAGGTTTGATGATGAACTTATGGAATCTCTGTTTGGATACACTGCGAACCAGAAACCCCCTGAAATGAATAACAAGCCAGTGACTTCAAGCAGTTCCAACTCTGCCCTGCCAACCCAAATTTTCATCCTGGAACCCCGAAAATCACAAAATACTGCAATTGTACTTAGATCTCTTGCAGTCTCTCGTAGAGAAATTCTAGATGCCCTCCTGGAAGGTCAAGGCCTCACCACTGATACTCTTGAAAAACTGACCAAAATTTCTCCAACTCAAGAAGAAGAATCCAAAATCCTGCAATTCAATGGCAATCCAACTAAGCTTGCTGATGCAGAGTCCTTTCTCTACCACATCCTGAAAGTTGTTCCTTCAGCGTTCATGCGCTTCAATGCAATGCTTTTCAGAACAAACTACGACCCTGAAATCCTTCACTTGAAGGAGTCTTTGCAAACACTTGAATTGGCCTGCAAGGAGCTAAGAAGTCGTGGGCTTTTCTTAAAACTTCTTGAAGCCATTCTCAAGGCTGGCAATAGAATGAATGCAGGAACCGCCAGAGGAAATGCCCAAGGCTTCAACCTTAGTGCTCTTCGTAGACTTTCAGATGTGAAGAGCATTGATGGAAAGACTACTTTACTTCACTTTGTAGTGGAACAAGTAGTTCGATCAGAGGGTAGGCGTTGTGCAATCAATCAGAACGATAGCCTGGACAGAAAGAAAGAGAAAGAGAATGAGAAAGAGAAAGAGAACAAAAAAGAGAAAGAGTACCTTATGCTTGGATTACCAGTGTTAGGGGGGCTAAGTACTGAATTCTATAATGTAAAGAAAGCTGCAGTCATAGACCATGATACTTTCATCAACATGTGCTCAACTCTCACAGCCCGTGTTGCTGAAATTCAGCTGCTTGTGGCAAGCTGCAGCAATGGCGAGAAGGGCAGGTTTGTGCAGGAAATGAAAGGGTTTCTAGAGGAATGTGAGGAGGAGCTTAAAGTGGTAAGAGTAGAGCAAACAAGGGTAATGGAGCTTGTGAAGAGAACAACAGAATATTACCAAGCGGGAGCTTCTAAAGACAAAGGGGGACAACCTCTTCAGTTGTTTCTCATTGTGAAGGATTTTCTTGACATGGTTGATCAAGCTTGCCAAGACATTTACAGGAGACTGCAGAAGAAGAATGTGACAAAGACTGTAGGATCATCCCCACCACTGTCACCAACAAGGCAGGCAGTGAGATTCACAAACTTGCAGTTACAATTCATGTCAGATATGAGCACACCAAGACCTTCAAATTACACACACAGAGGGAGAGAAAGGAGAGATACACACAGGAGAGGGAGAGAGAATATGGGAGAAACACTTGGAAATCGTATTAGATTGAGCGAAGAAATCGTGAACAGGGCTGCTTCTCAAGCCATGAGAGCTCACAATTCCGCTGGCAGGCCATTTCTTCTCGACAAAACCCGTGGCTTTGCTATTTTTGCGTTTGCTGGATCTTGGCTTCCCGATGATTGGTTTACGCACCCACCTTTTGGAGAAACAAAGATGGATGCTAGTACCTTTCCTTCTCTTCGAAGTGTAGGCAACGATGAAGTCGCTGTGGTCAACGCCTCCTTCCTCCGGCGATTCAAAGCCATCTTAGATCAGCTACCACTTGAGAGAGAGGTGCAAAAAGTAATTGCAGATAGGAGGCAAGTTGTTTTTACTGGCCACTCCTGGGGTGGTGCAATGGCCATCCTGGCAACTCTATACTTCTTGGAGAAGGCAGGGCCCAATCAGAACCCACCCCGCTGCATCACTTTCGGATCCCCCCTTGTCGGTGATCGGATCTTCGGTCATGCTGTCAGGCGGGAGAAATGGTCCGACCACTTCATCCATTTTGTGATGAGATTTGATGTTATCCCTCGTATTATGCTTGGCCCTGCATCCACTGAGCACCAACAAATTCTCAATTTCTTCAATCCCAGATCTCAATTTTACAGGGAACCCCTTGATCCTCCTTTAGGTTTCTATCTCAACGTGATGAGAAGTGCTTCCTCGGTTGCAATCCATGATGCCTGCATTCTCATGGGATGCACAAACCCGTTACTGGAAACTCTAAGGAACTTCACTGAGCTCAGCCCTTACAGACCTTTCGGGACTTACATCTTCTGCACTGGAAATGGAAAATTGGTTGTCTTAAAGAACCCGGATGCAGTTCTGCAGATACTGTTTTACTGTGCTCAGTTGAGCCAAGAAGAAGCTGCAGAGATTGCACAAAGAAGCCTACATGAACATTTGGCCTACGAAAATGAACTACAGGAGAGCTTAGGAATGCAGAATGTAGTTTATTTAGATAGTCTGGAAGACCTTCCATTGTCTTCCAATGGCGGTCCAGCCACAGTTAACATTGCCTTGAATGACCTCGGCCTGAGCCCACAAGCCAGGTTATGCCTTCGAGCTGCAGGAGGGTTTGAGAACCGAAGGTTAAGAAACCAGGTTAAGATTGATGATAATAAGCAAAAGATTAATGACGAATTAAGAAAGCTGAAAGATTACCAAGAAAAGGCCGAGACTCGCAAACTGGGTTACTACGACGCCTTCAAGCACCAAGAAGAAAAAGCTGACTTCGATGCTAATGTGAGCAGGCTTGTGCTAGCTGGTATCTGGGATGAGATCATTGAAATGTTGAGAAGGTACGAACTTCCAGATGAATTTGAGAACAGGAAAGAGTTAATAGAACTTGCAACCATATATCGCCGCATAATACACCCAAAGATGGCTCGAGCATGCTGA 4110 44.91 MNTLKNTAISSRNRLGRTRIMLMGFSLIYLKTNYLLIELYSMNGRKALGELDNPNQPQPPSLKRSATKIQNTEGRRILLPLQPKPTNFFYSLCDSIFSEFMGVKGHPWILPSLLCFSLLCLPCFSQPSSSPASSIPSSPNNSPISPQIPGAASHGKVGEVAGATAASAVVVAGVFFCFRKFVARQRQRDKNESSFRREEAEVMHEEFKHRGTLKGLIVDDNGVEVLYLRKLEGGQLRNSFSKVLNNPNEEERGKIVESMVDRPRKSKRIQEIPFLHESSDVIILEKEAKPVLKVPTLQPQVSVPSPPPPPPPVPSQPLPPPPQVIPIKKTPNPHSPPLPPNKKIPGPPPPPPPPPERKIPGPPPLPPIPTRRKPAAPPPPPKAGGLVSALKPPPVPRGKMNSNNRAEASTEGSSKGTDFGQMKLKPLHWDKVIANVDHSIVWDEINDGSFRFDDELMESLFGYTANQKPPEMNNKPVTSSSSNSALPTQIFILEPRKSQNTAIVLRSLAVSRREILDALLEGQGLTTDTLEKLTKISPTQEEESKILQFNGNPTKLADAESFLYHILKVVPSAFMRFNAMLFRTNYDPEILHLKESLQTLELACKELRSRGLFLKLLEAILKAGNRMNAGTARGNAQGFNLSALRRLSDVKSIDGKTTLLHFVVEQVVRSEGRRCAINQNDSLDRKKEKENEKEKENKKEKEYLMLGLPVLGGLSTEFYNVKKAAVIDHDTFINMCSTLTARVAEIQLLVASCSNGEKGRFVQEMKGFLEECEEELKVVRVEQTRVMELVKRTTEYYQAGASKDKGGQPLQLFLIVKDFLDMVDQACQDIYRRLQKKNVTKTVGSSPPLSPTRQAVRFTNLQLQFMSDMSTPRPSNYTHRGRERRDTHRRGRENMGETLGNRIRLSEEIVNRAASQAMRAHNSAGRPFLLDKTRGFAIFAFAGSWLPDDWFTHPPFGETKMDASTFPSLRSVGNDEVAVVNASFLRRFKAILDQLPLEREVQKVIADRRQVVFTGHSWGGAMAILATLYFLEKAGPNQNPPRCITFGSPLVGDRIFGHAVRREKWSDHFIHFVMRFDVIPRIMLGPASTEHQQILNFFNPRSQFYREPLDPPLGFYLNVMRSASSVAIHDACILMGCTNPLLETLRNFTELSPYRPFGTYIFCTGNGKLVVLKNPDAVLQILFYCAQLSQEEAAEIAQRSLHEHLAYENELQESLGMQNVVYLDSLEDLPLSSNGGPATVNIALNDLGLSPQARLCLRAAGGFENRRLRNQVKIDDNKQKINDELRKLKDYQEKAETRKLGYYDAFKHQEEKADFDANVSRLVLAGIWDEIIEMLRRYELPDEFENRKELIELATIYRRIIHPKMARAC* 1370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 8554505 8562707 - Vvi17g677 Vvi17g677 779374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g677 1369 Coils Coil 1274 1298 - -
Vvi17g677 1369 SUPERFAMILY Formin homology 2 domain (FH2 domain) 427 837 - -
Vvi17g677 1369 SUPERFAMILY alpha/beta-Hydrolases 930 1105 IPR029058 -
Vvi17g677 1369 MobiDBLite consensus disorder prediction 300 387 - -
Vvi17g677 1369 CDD Lipase_3 929 1110 - -
Vvi17g677 1369 Pfam Formin Homology 2 Domain 421 823 IPR015425 -
Vvi17g677 1369 PANTHER FORMIN-LIKE PROTEIN 329 875 - -
Vvi17g677 1369 PANTHER FORMIN-LIKE PROTEIN 148 339 - -
Vvi17g677 1369 Coils Coil 673 706 - -
Vvi17g677 1369 MobiDBLite consensus disorder prediction 877 892 - -
Vvi17g677 1369 MobiDBLite consensus disorder prediction 299 419 - -
Vvi17g677 1369 MobiDBLite consensus disorder prediction 402 417 - -
Vvi17g677 1369 Coils Coil 590 610 - -
Vvi17g677 1369 Gene3D Formin, FH2 domain 437 842 IPR042201 -
Vvi17g677 1369 PANTHER FORMIN-RELATED 329 875 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vvi17g677 1369 PANTHER FORMIN-RELATED 148 339 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vvi17g677 1369 SMART it6_source 414 838 IPR015425 -
Vvi17g677 1369 MobiDBLite consensus disorder prediction 869 892 - -
Vvi17g677 1369 Pfam Enhanced disease susceptibility 1 protein EP domain 1287 1363 IPR041266 -
Vvi17g677 1369 Pfam Lipase (class 3) 939 1083 IPR002921 GO:0006629
Vvi17g677 1369 Gene3D alpha/beta hydrolase 914 1106 IPR029058 -
Vvi17g677 1369 MobiDBLite consensus disorder prediction 131 153 - -
Vvi17g677 1369 MobiDBLite consensus disorder prediction 679 698 - -
Vvi17g677 1369 MobiDBLite consensus disorder prediction 131 148 - -
Vvi17g677 1369 ProSiteProfiles Formin homology-2 (FH2) domain profile. 414 849 IPR015425 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g1506 Vvi17g677 ECH
Vvi1g795 Vvi17g677 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g677 - K18875 vvi:100233033 939.488