Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi17g684 | ATGACAGCTGCAGCTCAATTGGTGAAGCCTGTTTCATTGGAGCTTGGTGGAAAGAGTTCCATTCTTGTGTTTGAGGATGTTGACCTTGACAAGGCTGCTGAATGGACTGCCTTTGGTTGCTTTTGGACAAATGGCCAAATATGTAGTGCAACTTCTCGTCTTCTTGTGCAAGAAAGCACTGCAGCAGAATTTTTAGACAAGCTTGTGAAATGGACCAAAAATATCAAGATTTCAGATCCCTTGGAAGAAGGTTGTAAACTTGGTCCTGTTGTCAGCAGAGGGCAGTATGAGAAGTTATCAGAGTTTATTTCAACAGCTACGAGTGAAGATGGAACAGTATTGTGTGGTGGGGGTTGTCCCCAGCATTTGAAGAGGGGTTTCTTCATTGAACCAACCATTATAAGTGATGTGACTACCTCCATGCAAATTTGGAGAGAGGAAGTTTTTGGACCTGTCCTATGTGTTAAAACACTTAGTACTGAAGATGAAGCCATTGAACTAGCAAATGACAGCTCTTATGCCTTAGCAGGTGCTGTAATTTCAGATGATCTGGAGAGGTGTGATCGTGTGTCAAAGGCCCTTAATGCAGGGATTGTATGGGTCAACTGCTCACAGCCATGCTTCTACCAAGCTCCATGGGGAGGCAATAAGCGTAGTGGTTTTGGGCGTGAACTAGGGCCATGGGGACTTGATAACTACTTAAATGTGAAGCAGGTCACTCAGTACATCTCCAGTGAACCATGGGGCTAG | 750 | 44.53 | MTAAAQLVKPVSLELGGKSSILVFEDVDLDKAAEWTAFGCFWTNGQICSATSRLLVQESTAAEFLDKLVKWTKNIKISDPLEEGCKLGPVVSRGQYEKLSEFISTATSEDGTVLCGGGCPQHLKRGFFIEPTIISDVTTSMQIWREEVFGPVLCVKTLSTEDEAIELANDSSYALAGAVISDDLERCDRVSKALNAGIVWVNCSQPCFYQAPWGGNKRSGFGRELGPWGLDNYLNVKQVTQYISSEPWG* | 250 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 8621044 | 8629178 | - | Vvi17g684 | Vvi17g684 | 779381 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi17g684 | 249 | Pfam | Aldehyde dehydrogenase family | 1 | 239 | IPR015590 | GO:0016491 | |
Vvi17g684 | 249 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 1 | 237 | IPR016162 | GO:0016491 | |
Vvi17g684 | 249 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 17 | 209 | IPR016163 | GO:0016620 | |
Vvi17g684 | 249 | SUPERFAMILY | ALDH-like | 1 | 242 | IPR016161 | GO:0016491 | |
Vvi17g684 | 249 | PANTHER | BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC | 1 | 249 | - | - | |
Vvi17g684 | 249 | PANTHER | BETAINE ALDEHYDE DEHYDROGENASE | 1 | 249 | - | - | |
Vvi17g684 | 249 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 41 | 52 | IPR016160 | GO:0016491 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi17g684 | K00130 | - | vvi:100246770 | 454.136 |