Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g685 ATGGGTAAGGGTATTTGGGTCCTTTCAAAAATAATTACTTTGACTTGTTATATGCCCCCATCCACTCGTCAACTCTTTATCGACGGCGAATGGGTCGAACCCATCAAGAAGGGGTGCATCCCCATCGTCAATCCCGCCATTGATCAAATAATCGGGGATATTCCGGCGGCCACCGGTGAAGATGTGGAGCTTGCTGTGGATGCTGCCCGAAGAGCCTTTGCCAGGAATAAGGAGGCAAATTGGGTTAACGCGCCTGGTGTTGTTCGTGCTAAGTATTTGCGTGCCATTGCTGCCAAGATAAGAGAGAGAAAGTCTGAATTGGCCAAACTCGAGGCAATTGATAGTGGAAAACCTCTGGATGAAACAACATGGGATATTGATGATGAGCCCGTTGGTGTTGTTGGATTGATTACACCATGGAATTACCCGCTGCTATTGGCTACATGGAAAGTAGCTCCTGCCCTGGCTGCTGGTTGTGCAGCAATACTAAAGCCATCCGAGTTGGCTTCTGTGACTTGTTTAGAGCTAGCTGATGTGTGTATAGAGGTGGGTCTGCCATAA 561 48.13 MGKGIWVLSKIITLTCYMPPSTRQLFIDGEWVEPIKKGCIPIVNPAIDQIIGDIPAATGEDVELAVDAARRAFARNKEANWVNAPGVVRAKYLRAIAAKIRERKSELAKLEAIDSGKPLDETTWDIDDEPVGVVGLITPWNYPLLLATWKVAPALAAGCAAILKPSELASVTCLELADVCIEVGLP* 187
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 8629207 8646306 - Vvi17g685 Vvi17g685 779382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g685 186 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 20 124 IPR016162 GO:0016491
Vvi17g685 186 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 125 186 IPR016162 GO:0016491
Vvi17g685 186 SUPERFAMILY ALDH-like 11 186 IPR016161 GO:0016491
Vvi17g685 186 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC 129 186 - -
Vvi17g685 186 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC 18 128 - -
Vvi17g685 186 Pfam Aldehyde dehydrogenase family 128 186 IPR015590 GO:0016491
Vvi17g685 186 Pfam Aldehyde dehydrogenase family 31 127 IPR015590 GO:0016491
Vvi17g685 186 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 129 186 - -
Vvi17g685 186 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 18 128 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g1460 Vvi17g685 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g685 K00130 - vvi:100246770 262.692