Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g694 ATGTCGCAGAAGCGCCACGCCGAGGATGGGAAGGCTCGATCGGAGGGGGGTTGTCCCGAGGATAAGAAGAGAAAGGTTCCTAGTTTGAAAAATGCAATTCTGGAAGTAATGAAGATGCAGTCATCGGTCCAGCATTTGATGGAGCCGATTCTGGAGCCTTTGATTCGTAAAGTGGTAAAAGAGGAAGTTGAAACGGCTCTGAGAAAGCATTTAAGCAATATGAAGCGGAATTTCGAGAAGGAGTTACATCCTTTTGAATCAAGAAGCTTACAATTACAATTCTCAAATGCTCTCTCTCTTCCAGTATTCACTGGTACTCGAATTGAAGGGGAAGATTGCTCTTCCATTCAAGTTGCTTTAGTTGATGGTCTTACTGGGGAAGTTGTTAAGTCTGGGCCTGAATCCTCAGCAAGGGTTGAAATAGTAGTCCTTGAGGGAGATTTTGATGGTGATGAAGGAGACAATTGGACACTTGAAGAGTTTAAGAATAACATTGTTAGAGAAAGGGAAGGAAAGAAACCCCTACTTACAGGGGATGCATTTTTAAATCTTAAAGATGGCGTTGGTTTTGTTAGTGAGATCTCCTTTACTGATAATTCAAGCTGGACAAGAAGCCGGAAGTTCAGGCTAGGGGCAAGAGTTGTGGATAACTCTGATGGAACTAGAATACGAGAAGCAAAGACAGAATCATTCATTGTCAGGGATCACCGGGGAGAATTGTACAAGAAGCACCACCCTCCATCTCTGATGGACGAAGTGTGGCGATTAGAGAAGATTGGAAAAGATGGAGCTTTCCACAAGCGTTTGAGTAGGGAAAGCATCACTACTGTAAAGGATTTTCTGACTCTACTCTATTTAGACTCACCAAGGCTCCGAAATATCCTTGGCACAGGTATGTCAACTAAGATGTGGGAAGTCACTGTGGAACATGCTCGGACGTGTGTAATTGATAAGAGGATTTTTATGTACTGTCCTCCTGGCCCTCAGCAAAAATCTGGTGTGGTTTTCAATACTGTGGGACAACTGATGGGGCTGCTTTCAGAATGCCAGTACATTCCCATTGATAAGCTGTCTGAAACTGAAAAGGTTGATGCCCATAACTTGATCGGTACTGCATTTAAACGCTGGGGAGAAGTTGTCTCTTTTGAGGATGAGAGCTCTCTTACGGCAAATTTCTGA 1179 43.51 MSQKRHAEDGKARSEGGCPEDKKRKVPSLKNAILEVMKMQSSVQHLMEPILEPLIRKVVKEEVETALRKHLSNMKRNFEKELHPFESRSLQLQFSNALSLPVFTGTRIEGEDCSSIQVALVDGLTGEVVKSGPESSARVEIVVLEGDFDGDEGDNWTLEEFKNNIVREREGKKPLLTGDAFLNLKDGVGFVSEISFTDNSSWTRSRKFRLGARVVDNSDGTRIREAKTESFIVRDHRGELYKKHHPPSLMDEVWRLEKIGKDGAFHKRLSRESITTVKDFLTLLYLDSPRLRNILGTGMSTKMWEVTVEHARTCVIDKRIFMYCPPGPQQKSGVVFNTVGQLMGLLSECQYIPIDKLSETEKVDAHNLIGTAFKRWGEVVSFEDESSLTANF* 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 8760310 8768301 + Vvi17g694 Vvi17g694 779391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g694 392 PANTHER CALMODULIN-BINDING PROTEIN 60 A 1 390 - -
Vvi17g694 392 Pfam Calmodulin binding protein central domain 249 314 IPR046830 -
Vvi17g694 392 MobiDBLite consensus disorder prediction 1 25 - -
Vvi17g694 392 Pfam Calmodulin binding protein C-terminal domain 320 382 IPR046829 -
Vvi17g694 392 PANTHER OS02G0177800 PROTEIN 1 390 IPR012416 GO:0005516
Vvi17g694 392 Pfam Calmodulin binding protein-like N-terminal domain 90 236 IPR046831 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g694 - - vvi:100255354 778.859