Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g707 ATGGATCGCTTTGTCTTTGTTGTCTACTCCAATGCTTTTGCCTCCCTCATCCTCTTCTCTATATCCTTCATCTTCCTCAGAACAAAGAGACCTCCTCTAAGTTTCTCTCTCCTCTGCAAATTCTTCCTCCTCAGCCTGGCTGGGATTACTGTGATGCAGAACTGTGTATTCACAGGCGTAAGCTACGGTTCACCAACGCTTGGCTCTGCTATGAGCAACTTGATCCCTGCTTTCACTTTCTTGCTTGCTGTTGCTTTCAGATTGGAGAACTTGGATTTGAGAAGCTCAAGAAGCCTGATAAAAATCCTGGGCACCCTAGTGTCAATCTCGGGAGCACTGATCGTAACCCTTTACAAGGGTCCTCCCATTGGTGCCGGATTGATTAAATCCCCATCAATCTCCTCCAACGACCATCTTCAGAAAACTGCAAACAATTGGGTTATTGGAGGCCTTTTCTTTGCTATGGCTGGTCTTTCAATTTCAGTATGGAACATTTTCCAGGCACCAATTCTGAGAAGGTACCCATCAGAGATTACCATAGTTTCCTTTTTCACATTGTTTGGGGCAATTCAATGTGCGGCAGTTGCTTTGATTGCAGTGAAAGACTCGAATGCTTGGAAACTAAGGCCCGATTTTGAACTCATCACTATAATCTACTCCGCTGTTTTTGGAGGTGTAGTGTCATTTTGTGTACAAACATGGTGCATAAAGAGGAAAGGGCCTGTTTTTGTGGCAATATTCAAGCCCTTGGGCATCGGAATTGCTGCCATAATGGGTGTCATCTTTCTTGGCGACACACTCTACATTGGAAGTGTTATAGGAGCAATTATAATCGTCACAGGTTTTTATGGAGTGATGTGGGCGCAAACCAAAGAAGGCGAAAAGGGTGAAGCCCAAGAAGTTGATGGGCTGCCGTCAACCTCAGAGAAGGCCCCTCTGCTGCAGAGCCGCAGAGATGAACAAAAGTGGTTGGATTAA 978 45.3 MDRFVFVVYSNAFASLILFSISFIFLRTKRPPLSFSLLCKFFLLSLAGITVMQNCVFTGVSYGSPTLGSAMSNLIPAFTFLLAVAFRLENLDLRSSRSLIKILGTLVSISGALIVTLYKGPPIGAGLIKSPSISSNDHLQKTANNWVIGGLFFAMAGLSISVWNIFQAPILRRYPSEITIVSFFTLFGAIQCAAVALIAVKDSNAWKLRPDFELITIIYSAVFGGVVSFCVQTWCIKRKGPVFVAIFKPLGIGIAAIMGVIFLGDTLYIGSVIGAIIIVTGFYGVMWAQTKEGEKGEAQEVDGLPSTSEKAPLLQSRRDEQKWLD* 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 8880241 8883008 - Vvi17g707 Vvi17g707 779404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g707 325 Pfam EamA-like transporter family 3 116 IPR000620 GO:0016020|GO:0016021
Vvi17g707 325 Pfam EamA-like transporter family 149 286 IPR000620 GO:0016020|GO:0016021
Vvi17g707 325 PANTHER WAT1-RELATED PROTEIN 1 314 - -
Vvi17g707 325 PANTHER WAT1-RELATED PROTEIN 1 314 IPR030184 GO:0016021|GO:0022857
Vvi17g707 325 MobiDBLite consensus disorder prediction 296 325 - -
Vvi17g707 325 SUPERFAMILY Multidrug resistance efflux transporter EmrE 16 119 - -
Vvi17g707 325 SUPERFAMILY Multidrug resistance efflux transporter EmrE 196 290 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g1392 Vvi17g707 ECH
Vvi1g760 Vvi17g707 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g707 - - vvi:100258662 609.757