Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g709 ATGGGGATGAAGGCATGGTTGTCAGGAATAGTGCCAATTGCAGCTATGGTGATGATGGAGTGTCTTGATGTGGGGTTGGTCACTCTCAGCAAAGCAGCCATGTCCAGAGGAATGAATCACTTTGTCTTTGTTGTCTACTACAACGCTCTTGCCTCCCTCATCTTCTTTCTTCTTTCCTTCATCTTCCACAGAACAAAGAGGCCCCCTCTCACTTTCTCTCACTTCTGTAAATTCTTCCTTCTCGGACTTCCTGGGATTACAGTGATGCAGAACTGGGTATTCACAGGCGTAAGTTACAGTTCACCCACACTTTGTTATGCTATGAGCAACTTGATCCCTGCTTTCACTTTCTTGCTTGCTGTTGCTATCAGACTTGAAGATTTGGATTTGAGAAGCTCAAGAAGCCAGATAAAACTCCTAGACAATTGGGTCATTGGAGGCCTTTTTTTTGCAGCTGCTTGTCTTTCACTTTCAGCATGGAACACTTGCCAGGCACCAATTCTGTCAAGCTGCTACCCATCAAATATCACCGTAATTTCCTTTATCACATTGTTTGGGGCGATTCAGAGTACAGCAGTTTCTCTGATTGCCGTGAGAGACTCAAATGCTTGGAAACTAAGGCCTGATATTGAACTCATCTCTATAATCTACTCAGCTATTATTGGTGTGGTAGCATTTTTTGTACAAAATTGGTGCATAAGGAGGAAAGGGCCTGTTTTTGCGTCAATGTTCAAACCCTTGGGCATGGGAATTGCTGCCATAATAGGTGTCATCTTCCTTGGCGAAACACTCCACATTGGAAGTGTTATAGGAGCAATTATAATTGCCACAGGCTGTTATGTAGTGGCATGGCTACAATACAGAGAAGAGGAAGAGAGTAAAGTCTGTGAAGTTGTCATGCTGCCTTCAACCTTTGAGAAGGCCCCAATGTTGGATGAGCCAGAGGGAAGCATGAGCCAATTTGATGGGTTTCACTGTGGATACAAGGAATATAATCCTGTTTATTCTGTAACATAA 1017 43.46 MGMKAWLSGIVPIAAMVMMECLDVGLVTLSKAAMSRGMNHFVFVVYYNALASLIFFLLSFIFHRTKRPPLTFSHFCKFFLLGLPGITVMQNWVFTGVSYSSPTLCYAMSNLIPAFTFLLAVAIRLEDLDLRSSRSQIKLLDNWVIGGLFFAAACLSLSAWNTCQAPILSSCYPSNITVISFITLFGAIQSTAVSLIAVRDSNAWKLRPDIELISIIYSAIIGVVAFFVQNWCIRRKGPVFASMFKPLGMGIAAIIGVIFLGETLHIGSVIGAIIIATGCYVVAWLQYREEEESKVCEVVMLPSTFEKAPMLDEPEGSMSQFDGFHCGYKEYNPVYSVT* 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 8903186 8905249 - Vvi17g709 Vvi17g709 779406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g709 338 SUPERFAMILY Multidrug resistance efflux transporter EmrE 212 287 - -
Vvi17g709 338 PANTHER WAT1-RELATED PROTEIN 141 310 IPR030184 GO:0016021|GO:0022857
Vvi17g709 338 PANTHER WAT1-RELATED PROTEIN 9 140 IPR030184 GO:0016021|GO:0022857
Vvi17g709 338 Pfam EamA-like transporter family 27 129 IPR000620 GO:0016020|GO:0016021
Vvi17g709 338 Pfam EamA-like transporter family 146 283 IPR000620 GO:0016020|GO:0016021
Vvi17g709 338 PANTHER WAT1-RELATED PROTEIN 141 310 - -
Vvi17g709 338 PANTHER WAT1-RELATED PROTEIN 9 140 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g753 Vvi17g709 ECH
Vvi14g1391 Vvi17g709 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g709 - - vvi:100258709 629.017