Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g722 ATGGCGGCTAGGAGGATCTCCTCGTTGCTCTCTCGTTCTCTCTCTGTCTCTTCTGCTTTTTCTCTTTCTCTAGGCAAAAATTTCAACAGAGGGAAAAGCATCCATCGCTTTAGCACTGCAGCAGCAGCAGCAGTTGAAGAACTCATCACTCCAACTGTTCAGATAAATTACACTCAACTTCTAATTAATGGGCAATTTGTAGATGCAGCATCGGGAAAAACATTCCCCACCTTTGACCCTCGCACGGGAGAAGTGATTGCTAATGTTGCAGAAGGTGATGCAGAAGATATCAATCGGGCAGTGTCCGCTGCTCGAAAGGCGTTTGATGAAGGACCATGGCCAAGGATGAGCCCCTATGAAAGGTCGCGGATATTGTTGCGGTTTGCTGATTTAGCCGAGAAACACAATGATGAGCTTGCAGCTCTAGAGACATGGAATAATGGGAAGCCATATGAACAGGCTGCCAAAGCTGAATTGCCACTGTTTGTTCGTCTATTTCGCTATTATGCAGGTTGGGCAGATAAAATCCATGGTTTAACAGTTCAGGCTGATGGCCCACACCATGTTCAGATATTGCACGAGCCAATTGGTGTTGCGGGACAGATTATTCCCTGGAATTTTCCTCTTATGATGTTTGCTTGGAAAGTTGGACCTGCACTAGCATGTGGTAATACCATTGTCCTAAAGACAGCAGAGCAAACACCTTTGACTGCTCTCTTTGCGGCAAAGCTATTTCATGAGGCTGGTCTTCCTCCCGGTATTTTAAATATCGTGTCTGGCTATGGTCCGACTGCTGGTGCTGCTCTTGCTAGTCATATGGATGTGGACAAGATTGCTTTCACAGGGTCGACTGATACTGGTAAGATTGTACAAGAATTGGCTTCAAAAAGCAATCTTAAACCAGTAACGCTAGAGCTTGGAGGTAAATCACCTTTCATTGTATGTGAGGATGCTGACATTGATCAAGCTGTAGAGCTAGCACACTTTGCTCTGTTCTTTAATCAGGGACAATGCTGCTGTGCTGGGTCTCGGACATTTGTTCATGAGAGTGTATACGATGAGTTTATTGAGAAAGCAAAGGCACGTGCTCTGAGTCGCACGGTCGGTGATCCTTTCAAGAAGGGCATCGAGCAAGGTCCTCAGATCGACCCAGAGCAATTTGCGAAGGTTCTCAGATACATAAGATCTGGTATTGAAAGCAATGCCACCCTTGAATGTGGAGGTGGAAGAATTGGCTCAAAAGGCTACTTTGTCCAACCCACTGTTTTCTCAAATGTTCAGGATGATATGCTGATTGCAAAGGATGAGATCTTTGGCCCTGTACAATCCATCTTGAAATACAAGGACCTTGATGAAGTGATTAGGAGGGCAAATTCAACGCGATACGGTCTAGCAGCAGGGGTGTTCACAAAGAACATCAACACTGCCAACACCTTGACAAGAGCATTGAGAGTGGGGACTGTATGGGTGAATTGCTTCGATGTGTTTGATGCTGCAATCCCATTTGGTGGGTACAAGATGAGTGGAGTAGGAAGGGAAAAGGGAATCTACAGCCTCAATAACTACTTGCAGGTGAAGGCTGTGATTACTCCACTGAAGAATCCAGCTTGGTTGTGA 1617 45.64 MAARRISSLLSRSLSVSSAFSLSLGKNFNRGKSIHRFSTAAAAAVEELITPTVQINYTQLLINGQFVDAASGKTFPTFDPRTGEVIANVAEGDAEDINRAVSAARKAFDEGPWPRMSPYERSRILLRFADLAEKHNDELAALETWNNGKPYEQAAKAELPLFVRLFRYYAGWADKIHGLTVQADGPHHVQILHEPIGVAGQIIPWNFPLMMFAWKVGPALACGNTIVLKTAEQTPLTALFAAKLFHEAGLPPGILNIVSGYGPTAGAALASHMDVDKIAFTGSTDTGKIVQELASKSNLKPVTLELGGKSPFIVCEDADIDQAVELAHFALFFNQGQCCCAGSRTFVHESVYDEFIEKAKARALSRTVGDPFKKGIEQGPQIDPEQFAKVLRYIRSGIESNATLECGGGRIGSKGYFVQPTVFSNVQDDMLIAKDEIFGPVQSILKYKDLDEVIRRANSTRYGLAAGVFTKNINTANTLTRALRVGTVWVNCFDVFDAAIPFGGYKMSGVGREKGIYSLNNYLQVKAVITPLKNPAWL* 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9063731 9068490 + Vvi17g722 Vvi17g722 779419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g722 538 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 24 538 - -
Vvi17g722 538 CDD ALDH_F2BC 55 530 - -
Vvi17g722 538 SUPERFAMILY ALDH-like 52 532 IPR016161 GO:0016491
Vvi17g722 538 Pfam Aldehyde dehydrogenase family 66 528 IPR015590 GO:0016491
Vvi17g722 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 72 528 IPR016162 GO:0016491
Vvi17g722 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 310 499 IPR016163 GO:0016620
Vvi17g722 538 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 24 538 - -
Vvi17g722 538 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 332 343 IPR016160 GO:0016491
Vvi17g722 538 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 304 311 IPR029510 GO:0016491
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g736 Vvi17g722 ECH
Vvi14g1384 Vvi17g722 ECH
Vvi1g738 Vvi17g722 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g722 K00128 - vvi:100262043 1055.05