Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g735 ATGGCTATCCGAGGAGTAGATTTCAAGTGGTATGATGGGTTTTTCTTGTCGATGCTCGCTACTAGTGTAATAATTGTAGCAATCAATTGGAAGCGATACGATCTATGTACATATCCGTTGCATATATGGATCATGGTTGACTATACCACTGTGTTTGTTTTTCGGCTCTTGATGTTTGTAGATAATGGGCTTGCTGCTGGAATGGGTTTGGATTTTGGGTGGCAGCAGAGATATGCTCGCTTTTGTGGAAGAATAGTGGTTCTTTCCATTCTTTCTTTGCTACTTTATCCCTTTCTTTGGGCTTGGACTGTAATTGGTACTCTGTGGTTCACTAGGGCAAGAGACTGTTTACCTGAAGAAGGTCAGAAATGGGGTTTCCTTATTTGGTTGCTTTTCAGCTATTGTGGACTCCTTTGCATTGCTTGCATGTCCATGGGGAAGTGGTTTTCACGAAGACAAGCACACTTACTACGTGCTCAACAAGGGATTCCTGTTTCAGAATATGGGGTTTTGGTGGACATGATCAGGGTACCAGATTGGGCTTTTGAAGCTGCAGGCCAGGAGATGAGAGGCATGGGTCAAGATGCTGCTGCATACCATCCTGGCCTTTACTTGACTCCAACTCAGAGGGAAGCAGTGGAGGCTCTTATTCAAGAACTTCCAAAGTTCAGGCTGAAGGCAGTTCCAACTGATTGCAGTGAATGTCCCATCTGCTTAGAAGAGTTCCATGTGGGAAATGAGGTTTTATACTGGATATGTTTGGTTCTCGGAAAATTTCAGGGAAAATGTTCGTGGCCTTCCCTGTGCTCACAATTTCCATGTGGAATGCATTGA 834 44.12 MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYDLCTYPLHIWIMVDYTTVFVFRLLMFVDNGLAAGMGLDFGWQQRYARFCGRIVVLSILSLLLYPFLWAWTVIGTLWFTRARDCLPEEGQKWGFLIWLLFSYCGLLCIACMSMGKWFSRRQAHLLRAQQGIPVSEYGVLVDMIRVPDWAFEAAGQEMRGMGQDAAAYHPGLYLTPTQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEVLYWICLVLGKFQGKCSWPSLCSQFPCGMH* 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9272856 9280462 + Vvi17g735 Vvi17g735 779432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g735 277 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SIS3 1 254 - -
Vvi17g735 277 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SIS3 1 254 IPR044793 GO:0004842|GO:0010182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g735 K16284 - vvi:100260484 517.694