Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g758 ATGGAAGAAACATTTGTTCCCTTCCGCGGAATCAAGAATGATCTCAAAGGAAGAATTTTATGCTACAAGCAAGACTGGACTGGCGGTCTTCGAGCAGGTATCGGGATTCTGGCTCCAACGACATACATATTCTTTGCTTCAGCAATTCCAGTCATATCTTTTGGGGAGCAGTTGGAAAGATACACAAATGGAACCTTAACTGCAGTGCAAACCCTTGCATCAACAGCCCTCTGTGGGATCATCCACTCAATTGTTGGAGGACAGCCACTGCTTATACTTGGAGTGGCGGAGCCAACAGTGTTGATGTACACATTTATGTTTAACTTTGCTAAGGACCGGAAGGATTTGGGGCAGGAACTCTTCTTGGCCTGGACAGGATGGGTTTGTGTATGGACAGCCCTATTGCTCTTTTTGCTGGCCATTCTGGGAGCATGCTCTATAATCAATAGATTCACACGCATTGCTGGTGAATTATTTGGTCTGCTTATTGCAATGCTCTTTATGCAGCAGGCTATTCGGGGAGTTGTGGAGGAATTTGGAATACCCCAGAGAGAAGATCGTAACCAAACTGCATTCCTGCCCTCTTGGCGCTTTGGCAATGGAATGTTTGCATTGGTTTTGTCCTTTGGCTTACTTCTTACTGCATTAAGGAGCCGTAAGGCTAGATCCTGGCGCTATGGTACAGGCTGGTTACGGGGGCTTATTGCGGATTATGGAGTCCCATTTATGGTGGTTGTGTGGACTGCTGTATCTTATATACCGGTTAATGATGTCCCAAAAGGGATCCCACGGCGGCTTTTCAGCCCAAATCCATGGTCTCCTGGTGCATACTCAAATTGGACTGTTATCAAGGAAATGTTGGATGTCCCCCCACTGTACATTGTTGGGGCATTTATTCCAGCAACTATGATTGCTGTGCTGTACTACTTTGATCACAGTGTTGCGTCTCAACTTGCACAGCAAAAGGAGTTCAATCTGAAGAAACCAGCTTCATATCACTATGATCTTCTTCTTTTGGGTTTCTTGGTCATATTGTGTGGTCTTATTGGCATTCCTCCTTCCAATGGAGTTATTCCACAATCTCCAATGCATACAAAAAGCTTAGCCACTCTGAAACATCAGCTTTTGCGGAATAAGCTCGTATCGACTGTCCGAAAAAGTATGCGTAAAAATGCAAACCTGGGTCAACTGTACAGTAGCATGCAAGAAGCATACAATGAAATGCAGACTCCACTTGTTTATCAAACTCCCCCTGCTCTGGGACTGAAAGAGCTGAAAGAATCCACAATCCAACTGGCCTCAAGTACAGGCTTCATTGATGCCCCAGTTGATGAGACGGTCTTTGATGTGGATAAAGATGTAGATGATCTTTTACCGGTTGAAGTCAAAGAACAACGCCTTAGCAATCTACTTCAGGCAATGATGGTTGGTGCGTGTGTTGCTGCCATGCCTGTTCTGAAGAAGATACCAACTTCAGTTCTTTGGGGCTATTTTGCTTTCATGGCGATTGAAAGCTTGCCTGGAAATCAGTTCTGGGAGAGAATTCTGTTACTTTTCACTGCTCCAAGTCGAAGATACAAGGTGTTGGAGGAGTGTCATGCAACATTTGTTGAGACTGTGCCATTCAAAGCAATTGCCACCTTCACCTTGTTCCAGACGGTCTACTTGCTTGTGTGTTTTGGTATAACATGGATCCCAATAGCTGGGGTCCTTTTCCCAATGATGATCATGCTTCTCGTTCCAGTACGGCAGTATTTGCTCCCCAAGTTTTTCAAAGGAGTCCATCTTCAAGAACTGGATGCAGCGGAATATGAAGAAGCCCCTGCCATGACTTTCAACATGTCATGTGAAGATCAGGATCCTCAAGCAAGAACTACCCACATTGATAGTGGGGAAATTCTTGATGAAATGATCACAAGAAGCCGTGGTGAGATCCGTAATACACAGAGCCCAAAAGTAACAAGCTCATCCCCTGCCTCACTAGGGGATATGAAACCTGCATATAGCCCTAGGCTATCACAGAGGGCATACAGCCCACGCTTGAGTGAGTTGAGGGCAGAACAGAGCCCCAGATTCACTGGAAAGGGAGTTGAGCTGAAAGAAACTCCCAGTCCTAGGCCATCTATCCTTGGGAAAAGTCCTCATGGTTCGTCTTCAAGCTAA 2163 45.45 MEETFVPFRGIKNDLKGRILCYKQDWTGGLRAGIGILAPTTYIFFASAIPVISFGEQLERYTNGTLTAVQTLASTALCGIIHSIVGGQPLLILGVAEPTVLMYTFMFNFAKDRKDLGQELFLAWTGWVCVWTALLLFLLAILGACSIINRFTRIAGELFGLLIAMLFMQQAIRGVVEEFGIPQREDRNQTAFLPSWRFGNGMFALVLSFGLLLTALRSRKARSWRYGTGWLRGLIADYGVPFMVVVWTAVSYIPVNDVPKGIPRRLFSPNPWSPGAYSNWTVIKEMLDVPPLYIVGAFIPATMIAVLYYFDHSVASQLAQQKEFNLKKPASYHYDLLLLGFLVILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVSTVRKSMRKNANLGQLYSSMQEAYNEMQTPLVYQTPPALGLKELKESTIQLASSTGFIDAPVDETVFDVDKDVDDLLPVEVKEQRLSNLLQAMMVGACVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEECHATFVETVPFKAIATFTLFQTVYLLVCFGITWIPIAGVLFPMMIMLLVPVRQYLLPKFFKGVHLQELDAAEYEEAPAMTFNMSCEDQDPQARTTHIDSGEILDEMITRSRGEIRNTQSPKVTSSSPASLGDMKPAYSPRLSQRAYSPRLSELRAEQSPRFTGKGVELKETPSPRPSILGKSPHGSSSS* 721
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9805984 9812712 + Vvi17g758 Vvi17g758 779455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g758 720 MobiDBLite consensus disorder prediction 643 662 - -
Vvi17g758 720 PANTHER BORON TRANSPORTER 2-RELATED 1 705 - -
Vvi17g758 720 PANTHER ANION EXCHANGE PROTEIN 1 705 IPR003020 GO:0005452|GO:0006820|GO:0016020
Vvi17g758 720 MobiDBLite consensus disorder prediction 641 720 - -
Vvi17g758 720 Pfam HCO3- transporter family 460 550 IPR011531 GO:0006820|GO:0016021
Vvi17g758 720 Pfam HCO3- transporter family 7 179 IPR011531 GO:0006820|GO:0016021
Vvi17g758 720 Pfam HCO3- transporter family 202 373 IPR011531 GO:0006820|GO:0016021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g758 K24194 - vvi:100251908 1403.27