Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g761 ATGCAGAGCACCGCTTTCACTTTCTCTCCTTCCATCTCCTCCATCTCTCTCTCCAAACCTCTCAAGCCTGCCGCTTCTCTCTCTAGATTCAGACATATTTCCCTCTCTTCTTCTTCTTCCAAATCTCCTGATCTCGCCTCTTCCAATGGCGTCTCTGCTTCGTCCTCCGTTCGGACGCCGGCTGCGCTCTCCTCGTCGAGGTTCGGCGCGTTTGGTTCTGCTCCCTACCTCGTTGAGGATCGGAGGAGGGGTGATTTGACGGTTAGGGCGAGTTCGGTGCCGGAGAGCGCCGGGGAGAGCGAGAAGTCGGGGAACTTGGTTCAGACGTTGCAGCTCGGGTTGTTGTTCGGTCTTTGGTACCTTTTCAATATCTACTTCAATATCTACAACAAGCAGGTTCTGAAGGTCTACCCATTCCCTGTAACTGTCACCGTGGTTCAGTTTGCAGTAGGGACTGTACTTGTTATTCTTATGTGGGGACTTAATCTATATAAGAGACCAAAAATTAGCAGTTCGCAGCTTGTAGCAATCCTGCCACTTGCTGTGGTGCACACGTTAGGCAACCTGTTTACTAATATGAGTCTTGGGAAAGTGTCTGTTTCATTCACTCACACAATTAAAGCTATGGAGCCCTTTTTCTCAGTTGTCCTCTCTGCTATGTTTCTAGGAGAGTTTCCTACAATCTGGGTGCTCTCCTCCCTTCTTCCTATTGTTGGTGGAGTGGCGCTGGCATCAGCCACTGAGGCCTCCTTCAATTGGTCCGGGTTTTGGAGTGCAATGGCATCAAATTTGACAAACCAATCTCGTAATGTTCTTAGCAAGAAGTTCATGATTAAGAAAGAGGATTCATTGGATAACATTACCCTCTTCTCAATAATCACAATTATGTCCTTTATCTTGTTAGCCCCTGTGTCTATTTTCATGGAAGGCATAAATTTTACCCCTTCATATCTGCAGTCTGCTGGACTGAATATGGGACAGATCTACAAAAGGTCTCTCATTGCCGCACTCTGCTTCCACGCATATCAGCAGGTCTCTTATATGATATTGCAAAGGGTATCCCCAGTTACCCACTCTGTGGGTAATTGTGTTAAGCGGGTGGTGGTCATTGTTACTTCTGTTCTCTTCTTCCGCACCCCTGTTTCACCGGTCAACTCATTGGGCACTGGCGTGGCCCTTGCTGGAGTGTTCCTGTATTCAAGAGTGAAGCGCATCAAGCCAAAGACAGCTTGA 1233 47.77 MQSTAFTFSPSISSISLSKPLKPAASLSRFRHISLSSSSSKSPDLASSNGVSASSSVRTPAALSSSRFGAFGSAPYLVEDRRRGDLTVRASSVPESAGESEKSGNLVQTLQLGLLFGLWYLFNIYFNIYNKQVLKVYPFPVTVTVVQFAVGTVLVILMWGLNLYKRPKISSSQLVAILPLAVVHTLGNLFTNMSLGKVSVSFTHTIKAMEPFFSVVLSAMFLGEFPTIWVLSSLLPIVGGVALASATEASFNWSGFWSAMASNLTNQSRNVLSKKFMIKKEDSLDNITLFSIITIMSFILLAPVSIFMEGINFTPSYLQSAGLNMGQIYKRSLIAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVTSVLFFRTPVSPVNSLGTGVALAGVFLYSRVKRIKPKTA* 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9846862 9851923 - Vvi17g761 Vvi17g761 779458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g761 410 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 88 387 - -
Vvi17g761 410 PANTHER SOLUTE CARRIER FAMILY 35 88 387 - -
Vvi17g761 410 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 110 408 IPR004696 GO:0016021|GO:0022857|GO:0055085
Vvi17g761 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 156 245 - -
Vvi17g761 410 MobiDBLite consensus disorder prediction 35 57 - -
Vvi17g761 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 324 404 - -
Vvi17g761 410 Pfam Triose-phosphate Transporter family 110 400 IPR004853 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g1332 Vvi17g761 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g761 K15283 - vvi:100248370 721.85