Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g814 ATGAAAGTAGAAACTAGTCAAAGGTTTTTTATTTGGGCCTGCAAGCTTTCTAATCTAACAGCCGGCGAGAGGACTTCTCCGCCACCGGAATCTGCACGCATGTTGCCCCTTCTCCTGGTTCCTCTCTTCACCTTCCTCTTTGTTTCACCTTCTTTGTCTGTTAATTTCCTCTACAACTCCTTCAATGCCTCCGATGCTTCCTACCTCGAGCTCATCAACGATGCCAGAGTTGAAGGTTCTGTTATCCGATTGACTAATGATTCGAATCAATTCTCCTTCGGGAGAGTCTTCTACCCAACTCGACTCACCATGAAACCCACCTCGAATTCCACCGCCGTCGCTTCATTTTCGACTTCCTTCGTCTTCTCTATCCTCCCTGATATCAGTGACAGTCCCGGCTTCGGCCTCGCTTTCGTCCTCTCCAACTCCACCTCACCTCCTGGAGCTCTCGCCAGCCAATACTTCGGCCTTTTTTCCAATGCCACCGTTCCTTCCGTTGCCCCTTTGCTTGCTGTTGAATTCGATACCGGTCAGAACCCGGAATTCAACGACATAGATGGTAATCATGTCGGGATCGACCTTAATAACATTGAATCTGAATCAGATGGTACTCAGACGGCCGGATACTATAATTCCTCCGGCGATTTTGTGGCGGTGGAGATGCGGAACGGCCAGAATATACGAGCTTGGATTGAATTCGATGGACCCCAATTCGAAATCAATGTCACAATTGCTCCTGTTGCAGTGTCCAAACCATCTAGGCCTTTGATCAGTTACAGAAATCCAAAGATTGCCAACTATGTATCAACAGAAATGTATGTGGGGTTTTCTGCATCGAAGACCAACTGGGTTGAGGCGCAGAGGATTTTAGCATGGAGTTTGAGCGATACTGGAGTTGCTGCAGATATCAATACCACGAATCTCCCAGTTTTCTCGCCTGAAACGGCTTCATCTTCATTGTCAGCTGGGGCAATTGCAGGAATCGCAATAGCTTCTGTTGTGTTTCTCCTCATCTGTTTATCTGGGGGTTACTGGTTTTGGAGGAAGACCAAGATAGAAGAGGAAGATGAGATTGAAGACTGGGAGCTCGAAGAATTCATGGCTGAGATCGCCAGCATGGGCAGACTTCAACACATAAACCTCGTCCAAATGCGAGGTTGGTGCAGAAAAGGCAATGAATTGATGCTTGTCTACGACTTCATGCCCAATGGCAGCCTCAATCGGTGGATCTTCGATAACCCCAAGACGCTACTGGGCTGGGAAGGGCGGCGAAGAGTCCTCGCCGACGTTGCAGAGGGGTTAAACTACCTCCACCAGGGTTGGGACAAGGTGGTGATTCACAGAGACATCAAATCAAGCAACATCCTGTTGGATTCAGAGATGCGAGGCAGACTCGGAGACTTTGGCCTCGCAAAGCTTTACGAGCACGGCGCGGCTCCCAACACTACGAGAGTGGTGGGCACACTCGGGTACTTGGCACCGGAGCTGGCGACGGTGACCGCGCCGACGGCGGCGAGTGACGTCTACAGCTTTGGAGTGGTGGTACTGGAGGTCGCATGCGGGCGACGGCCGATAGAGACGTGGGCGGCGGAGGAGGAGCAGGTGTTGATCGATTGGGTGAGGGAGAAGTATCTGGATGGGAGGGTTTGTGAAGCGGCGGACAAGAGGATCGCCGGCCAGTACGTGGTGGAGGAGATGGAAAGAGTTTTGAAGCTGGGATTGGCTTGTTGCCACCCTGATCCACAGCACCGCCCGACCATGAAGGAGGTGGTGACGGTGTTGGTCGGCGAGGAGGCCGCGGCCGCTCCGGCGGCCGTGCTGTCGGAGTTGGCGCAGGCAGGTGAAAGTGTTGGTTGCAGTGGCGGTGATACGAACGCAGAGGAGCCGCCGCTCCAGTCCACTGTGTGA 1908 52.52 MKVETSQRFFIWACKLSNLTAGERTSPPPESARMLPLLLVPLFTFLFVSPSLSVNFLYNSFNASDASYLELINDARVEGSVIRLTNDSNQFSFGRVFYPTRLTMKPTSNSTAVASFSTSFVFSILPDISDSPGFGLAFVLSNSTSPPGALASQYFGLFSNATVPSVAPLLAVEFDTGQNPEFNDIDGNHVGIDLNNIESESDGTQTAGYYNSSGDFVAVEMRNGQNIRAWIEFDGPQFEINVTIAPVAVSKPSRPLISYRNPKIANYVSTEMYVGFSASKTNWVEAQRILAWSLSDTGVAADINTTNLPVFSPETASSSLSAGAIAGIAIASVVFLLICLSGGYWFWRKTKIEEEDEIEDWELEEFMAEIASMGRLQHINLVQMRGWCRKGNELMLVYDFMPNGSLNRWIFDNPKTLLGWEGRRRVLADVAEGLNYLHQGWDKVVIHRDIKSSNILLDSEMRGRLGDFGLAKLYEHGAAPNTTRVVGTLGYLAPELATVTAPTAASDVYSFGVVVLEVACGRRPIETWAAEEEQVLIDWVREKYLDGRVCEAADKRIAGQYVVEEMERVLKLGLACCHPDPQHRPTMKEVVTVLVGEEAAAAPAAVLSELAQAGESVGCSGGDTNAEEPPLQSTV* 636
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 10749583 10751781 - Vvi17g814 Vvi17g814 779511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g814 635 ProSiteProfiles Protein kinase domain profile. 314 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi17g814 635 SUPERFAMILY Protein kinase-like (PK-like) 333 594 IPR011009 -
Vvi17g814 635 Gene3D Phosphorylase Kinase; domain 1 347 404 - -
Vvi17g814 635 SMART serkin_6 320 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi17g814 635 CDD lectin_legume_LecRK_Arcelin_ConA 54 298 IPR001220 GO:0030246
Vvi17g814 635 Pfam Legume lectin domain 54 308 IPR001220 GO:0030246
Vvi17g814 635 SUPERFAMILY Concanavalin A-like lectins/glucanases 53 311 IPR013320 -
Vvi17g814 635 PANTHER - 363 629 - -
Vvi17g814 635 PANTHER - 37 363 - -
Vvi17g814 635 Gene3D Transferase(Phosphotransferase) domain 1 405 606 - -
Vvi17g814 635 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.1 37 363 - -
Vvi17g814 635 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.1 363 629 - -
Vvi17g814 635 Gene3D - 52 310 - -
Vvi17g814 635 Pfam Protein kinase domain 351 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi17g814 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Vvi17g814 635 ProSitePatterns Legume lectins beta-chain signature. 170 176 IPR019825 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76332 PF00069 Pkinase 5.10E-42 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g814 - - vvi:100246642 1003.82