Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g85 ATGTTTTGGTCCTACCAACGCCAAGAGATCGAGCAGGTGAACGACTTCAAGAACCACCAACTGCCTCTGGCCCGCATCAAGAAGATTATGAAGGCGGATGAGGATAGGAGGACGCTGCAGAAGAATGATATCGCCGCGGCGATTACTAGGACGGATATATTTGATTTTTTGGTGGATATTGTGCCGAGGGATGAGATCAAGGACGAGGGGGGGTTGGGGATGGTAGGATCGACGGCCAGTGGGGTGCCGTACTATTATCCGCCGATGGGGCAGCCCGCGCCGGGGGTAATGATGGGAAGGCCGGCGGTTCCGGGGGTGGATCCGGGGGTGTACGTGCAGCCGCCGTCGCAGGCGTGGCAGTCGGTGTGGCAGACGGCAGAGGATGGGTCGTACGGGAGCGGAGGGAGCAGTGGACAGGGGAATCTTGATGGCCAAGGTGTGGGGTTCTTGCCCCCACCCCCCATAATAGTCTATTTGTTTGGTGAGGAAGGATTTGACCTGAGGCCAGGTGATGAAAAGGGGGTGGAAGTTAGGCAACCAGTGATGTTGTTTTCATCTCTCTGTTGTACCAGAATTGCAAGCACCTGTAAGAATATTGACATTTTAAGCAAACGCCCATTGTGGATGTTGTGGTGCTTCCCAGCATGA 648 55.09 MFWSYQRQEIEQVNDFKNHQLPLARIKKIMKADEDRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEGGLGMVGSTASGVPYYYPPMGQPAPGVMMGRPAVPGVDPGVYVQPPSQAWQSVWQTAEDGSYGSGGSSGQGNLDGQGVGFLPPPPIIVYLFGEEGFDLRPGDEKGVEVRQPVMLFSSLCCTRIASTCKNIDILSKRPLWMLWCFPA* 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 802903 807282 - Vvi17g85 Vvi17g85 778782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g85 215 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4 1 37 - -
Vvi17g85 215 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4 36 145 - -
Vvi17g85 215 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 37 - -
Vvi17g85 215 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 36 145 - -
Vvi17g85 215 Gene3D Histone, subunit A 35 63 IPR009072 GO:0046982
Vvi17g85 215 Gene3D Histone, subunit A 1 34 IPR009072 GO:0046982
Vvi17g85 215 SUPERFAMILY Histone-fold 7 57 IPR009072 GO:0046982
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g85 - - vvi:100259532 270.781