Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g851 ATGCACCAACTAGGCATCTATCCTTACCGTTCTCTTCTATGCTTAGCTCGGTGCTATGGCCCGCTCATGCTTCTTCAGCTTGGCAGGGTCCGGACACTTGTTGTGTCATCCCCAGATGCTGCCCAGGAGATCATGAAAACGCATGATCTCATCTTTGCTAACAGGCCCAAGATGAGTTTGGGAAAGAGACTTCTGTATGATTACAAGGATGTGTCGGTGGCTCCTTATGGGGAGTACTGGAGGCAGATGAGAAGCATTTGTGTGCTCCACCTTCTTAGTAACAAGAGGGTTCAGTCTTTTAACACTGTTAGAAGAGAAGAAATCTCCCTCTTGATCCAGAAGATTGAAGAGTTTTCTTCATTATCAACGTCTATGGACTTGAGTGGAATGTTTATGAGGCTTACAAATGATGTGATATGCAGGGTGGCTTTTGGGAGGAAGTACAGTGGAGATGAAAGAGGGAAGAAGTTCAGAAGATTGTTGGGGGAGTTTGTGGAGTTATTGGGAGGTTTCAATGTAGGGGACTACATTCCATGGCTTGCTTGGGTGGAATATGTAAATGGTTGGAGTGCCAAGGTGGAGAGAGTTGCCAAAGAATTTGATGAATTTTTGGATGGAGTAGTTGAAGAGCATTTGGATGGTGGTACGGGTTCAATTGCTAAAGGTGATAACGAGAAGGATTTTGTGGACGTTTTGCTTGAAATTCAGAGGGATGGAACTCTTGGCTTTTCCATGGACAGAGATAGCATCAAAGCTCTCATTTTGGATATATTCGCTGGTGGAACTGATACTACTTACACAGTGCTAGAATGGGCAATGACAGAACTCTTAAGGCACCCCAAAGCCATGAAGGAACTGCAGAATGAAGTGAGGGGAATTACAAGAGGCAAAGAGCACATAACTGAGGATGACTTGGAGAAAATGCACTACTTGAAAGCGGTAATCAAAGAGACTCTTCGGCTGCATCCTCCCATTCCATTACTGGTTCCACGAGAATCAAGCCAGGATGTCAACATAATGGGCTACCATATTCCAGCTGGAACGATGGTTATTATCAATGCTTGGGCCATTGGAAGAGACCCCATGTCCTGGGATGAGCCGGAGGAATTTAGGCCAGAGAGGTTCTTGAACACTAATATAGATTTCAAAGGACATGACTTTGAGTTGATTCCCTTTGGAGCTGGAAGGAGGGGTTGCCCAGGAATCTCATTTGCTATGGCCACAAATGAGCTTGTATTAGCAAATCTTGTGAACAAGTTTGACTGGGCATTGCCTGATGGAGCAAGAGCAGAGGATTTGGACATGACTGAATGCACTGGTCTTACTATCCATAGAAAGTTTCCTCTGCTTGCTGTTTCAACTCCATGTTTTTAG 1374 44.69 MHQLGIYPYRSLLCLARCYGPLMLLQLGRVRTLVVSSPDAAQEIMKTHDLIFANRPKMSLGKRLLYDYKDVSVAPYGEYWRQMRSICVLHLLSNKRVQSFNTVRREEISLLIQKIEEFSSLSTSMDLSGMFMRLTNDVICRVAFGRKYSGDERGKKFRRLLGEFVELLGGFNVGDYIPWLAWVEYVNGWSAKVERVAKEFDEFLDGVVEEHLDGGTGSIAKGDNEKDFVDVLLEIQRDGTLGFSMDRDSIKALILDIFAGGTDTTYTVLEWAMTELLRHPKAMKELQNEVRGITRGKEHITEDDLEKMHYLKAVIKETLRLHPPIPLLVPRESSQDVNIMGYHIPAGTMVIINAWAIGRDPMSWDEPEEFRPERFLNTNIDFKGHDFELIPFGAGRRGCPGISFAMATNELVLANLVNKFDWALPDGARAEDLDMTECTGLTIHRKFPLLAVSTPCF* 458
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 11179543 11181431 - Vvi17g851 Vvi17g851 779548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g851 457 PANTHER CYTOCHROME P450 71B11-RELATED 1 455 - -
Vvi17g851 457 PRINTS E-class P450 group I signature 312 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g851 457 PRINTS E-class P450 group I signature 399 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g851 457 PRINTS E-class P450 group I signature 134 152 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g851 457 PRINTS E-class P450 group I signature 249 266 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g851 457 PRINTS E-class P450 group I signature 269 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g851 457 PRINTS E-class P450 group I signature 40 61 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g851 457 PRINTS E-class P450 group I signature 389 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g851 457 PRINTS E-class P450 group I signature 16 35 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g851 457 PRINTS E-class P450 group I signature 353 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g851 457 Gene3D Cytochrome P450 1 449 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g851 457 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 392 401 IPR017972 GO:0005506|GO:0016705
Vvi17g851 457 PANTHER CYTOCHROME P450 71A8-LIKE 1 455 - -
Vvi17g851 457 Pfam Cytochrome P450 10 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g851 457 PRINTS P450 superfamily signature 313 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g851 457 PRINTS P450 superfamily signature 390 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g851 457 PRINTS P450 superfamily signature 260 277 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g851 457 SUPERFAMILY Cytochrome P450 4 454 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g851 - - vvi:100253593 921.768