Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi17g854 | ATGGATACGTGTTTCAGTAGCTTTCTGCTGCATATAAACCAAGGAATCCCAGAGCTTGCGATAGAAAGCACGCATTTAGGTACACACAAAAAGAAAATGGGAAGCTTTCTAGGTCTTCTGTACAAGGAAAACGACTCGTTCTTTCTGCTTCTTCTTCCCTTTTTCATCTTCACACACTTCCTCATTAAATGGCTATATCCTACTACTCCTGCAGTCACCACAAAAAAGTTACTTCCTTCCCCACCAAAGCTCCCAATCATTGGAAACCTCCACCAACTAGGCTCGCTCCCTCACCGTTCTCTCTGGGCCTTGGCTCAGCGCCATGGCCCCCTTATGCTGCTCCACTTTGGCAGGGTTCCAGTGGTCATCGTCTCAGCTGTAGACGCTGCAAGAGAGATCATGAAGACCAATGATGCCATCTTCTCAAATAGGCCTAAATCAAACATCTCGGCAAAGCTTCTCTATGATTACAAGGACGTTTCCACGGCCCCCTATGGAGAGTACTGGAGACAGATGAGGAGTATCTGTGTACTCCACCTTCTCAGCACCAGAAGGGTTCAGTCCTTCCGAGGTGTCCGAGAAGAAGAGACAGCCCTTCTGATGGAGAAGATCTCTTCCTCTTCTTCCTCCTCCATCCCAATTGATTTGAGCCAAATGTTTCTGTCCCTAACAAATGATCTCATATGCAGAGTTGCCCTAGGACGAAAATACATGGAGAAAGATTTTGTGGACGTTTTGCTTGGCATTCAGGAGGATAATGTCACAGGCGTTGCCATAACTGGAGTTTGCATCAAAGCTCTGACTCTGGACATGTTTGCTGCTGGAAGTGATACTACATACACGGTCCTAGAGTGGGCAATGACAGAGCTCTTGAGGCACCCACAAGTCATGAGGCAACTTCAGAATGAGGTCCGAGGAATTGCTCAAGGCAAACTCCTCATAACTGAAGATGACTTGGACAAAATGCAATATTTGAAGGCAGTGATCAAAGAGACTCTCAGACTATACCCTCCAATCCCACTACTAGTTCCCAGAGAATCCACCCGCGACGCCAAAATAATGGGCTACGACATTGCAGCACGGACACAAGTCATTACCAATGTATGGGCAATTGGGAGAGATCCACTGCTGTGGGATGAGGCCGAGGAGTTTCGGCCAGAAAGGTTCTTGAACTCTTCTATAGATTTCAGGGGGCAAGACTTTGAGTTGATCCCATTTGGATCTGGCCGGAGAGGTTGCCCGGGAACTCTGTTCGCGGCAATGGCAATTGAGGTTGTGTTAGCAAATCTTGTTCATCGGTTTGATTGGGAAGTGGGTGGTGGAGGTAGAAGGGAGGATTTGGATATGACTGAATGCACTGAATTTTTTTCTTCTGTTTTTATACCTAGAATAATAATAAATATTCTTTTAATTTGTGCTTTAATTTTATATTCTAAAATTATATTCAAAATGCTCTAA | 1458 | 45.34 | MDTCFSSFLLHINQGIPELAIESTHLGTHKKKMGSFLGLLYKENDSFFLLLLPFFIFTHFLIKWLYPTTPAVTTKKLLPSPPKLPIIGNLHQLGSLPHRSLWALAQRHGPLMLLHFGRVPVVIVSAVDAAREIMKTNDAIFSNRPKSNISAKLLYDYKDVSTAPYGEYWRQMRSICVLHLLSTRRVQSFRGVREEETALLMEKISSSSSSSIPIDLSQMFLSLTNDLICRVALGRKYMEKDFVDVLLGIQEDNVTGVAITGVCIKALTLDMFAAGSDTTYTVLEWAMTELLRHPQVMRQLQNEVRGIAQGKLLITEDDLDKMQYLKAVIKETLRLYPPIPLLVPRESTRDAKIMGYDIAARTQVITNVWAIGRDPLLWDEAEEFRPERFLNSSIDFRGQDFELIPFGSGRRGCPGTLFAAMAIEVVLANLVHRFDWEVGGGGRREDLDMTECTEFFSSVFIPRIIINILLICALILYSKIIFKML* | 486 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 11202227 | 11204433 | + | Vvi17g854 | Vvi17g854 | 779551 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi17g854 | 485 | PRINTS | P450 superfamily signature | 274 | 291 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi17g854 | 485 | PRINTS | P450 superfamily signature | 327 | 338 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi17g854 | 485 | PRINTS | P450 superfamily signature | 404 | 413 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi17g854 | 485 | PRINTS | P450 superfamily signature | 413 | 424 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi17g854 | 485 | Gene3D | Cytochrome P450 | 239 | 458 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi17g854 | 485 | PANTHER | CYTOCHROME P450 71A21-RELATED | 239 | 453 | - | - | |
Vvi17g854 | 485 | PANTHER | CYTOCHROME P450 71A21-RELATED | 47 | 238 | - | - | |
Vvi17g854 | 485 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 406 | 415 | IPR017972 | GO:0005506|GO:0016705 | |
Vvi17g854 | 485 | PRINTS | E-class P450 group I signature | 105 | 124 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi17g854 | 485 | PRINTS | E-class P450 group I signature | 326 | 344 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi17g854 | 485 | PRINTS | E-class P450 group I signature | 367 | 391 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi17g854 | 485 | PRINTS | E-class P450 group I signature | 403 | 413 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi17g854 | 485 | PRINTS | E-class P450 group I signature | 413 | 436 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi17g854 | 485 | Gene3D | Cytochrome P450 | 72 | 238 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi17g854 | 485 | Pfam | Cytochrome P450 | 239 | 449 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi17g854 | 485 | Pfam | Cytochrome P450 | 79 | 237 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi17g854 | 485 | SUPERFAMILY | Cytochrome P450 | 79 | 456 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi17g854 | 485 | PANTHER | CYTOCHROME P450 71B11-RELATED | 47 | 238 | - | - | |
Vvi17g854 | 485 | PANTHER | CYTOCHROME P450 71B11-RELATED | 239 | 453 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi17g854 | - | - | gsj:114368383 | 429.483 |