Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g856 ATGGGAAGCTTTCTAGATCTTCTGTACAAGGAAAACGCGTCGTTCTTTCTGCTATTTCTCCCCTTTTTCGTCTTCATATACTTCCTCATCAAATGGCTCTATCCTACTACTCCTGCAGTCACCACAAAGAGGCTACCTCCTTCCCCACCAAAGCTCCCAATCATTGGAAACCTCCACCAACTAGGCTTGCTCCCTCACCGCTCCCTCTGGGCCTTGGCTCAGCGCCATGGCCCCATTATGCTGCTCCATTTTGGCAAAGTTCCAGTGGTCATCGTCTCAGCTGCAGACGCTGCAAGAGAGATCATGAAGACCAATGATGTCATCTTTTTAAACAGACCTAAATCGAGCATCTTTGCGAAACTTCTCTATGATTACAAGGACGTTTCCATGGCCCCCTATGGAGAGTACTGGAGACAGATGAGGAGTATCTGTGTACTCCACCTTCTCAGCAACAGAAGGGTTCAGTCCTTCCGAGGAGTCCGCGAAGAAGAGACAGCCCTTCTGATGGAGAAGATCTCTTCCTCTTCTTCCTCCTCCACCCCAATTGATTTGAGCAAAATGTTTCTGTCCCTAACAAATGATCTCATATGCAGAGTTGCCCTAGGAAGAAAATACAGCGGAGATGAAACTGGAAGAAAATATAGAGAACTGCTGAAGGAGTTTGTGGGGTTGCTGGGTGGCTTCGATGTTGCCGACTACATTCCATGGCTGTCATGGGTGAACTTCATCAATGGTTTGGATGCAAAAGTGGAGAAAGTTGCTAAAGAGTTCGATAGATTTCTTGATGAAGTGGTGAAAGAGCACGTGGAGAGAAGGAAAAGAGGTGTAGATGAGGAAGTGAAGGATTTTGTGGACGTTTTGCTTGGCATTCAGGAGGATAATGTCACAGGCGTTGCCATAACTGGAGTTTGCATCAAAGCTCTTACTCTGGACATGTTTGCTGCTGGAAGTGACACTACATACACAGTCTTGGAGTGGGCAATGACAGAGCTCTTGAGGCACCCACAAGTCATGAGGCAACTTCAGAATGAGGTCAGAGGAATTGCTCAAGGCAAACTCCTCATAACTGAGGATGACTTAGACAAAATGCAATATTTGAAGGCAGTGATCAAAGAGACTCTCAGACTACACCCTCCAGTCCCACTACTACTTCCCAGAGAATCCACCCGGGGCGCCAAAATAATGGGCTACGACATTGAAGTAGGGACACAAGTCATTACCAATGCATGGGCAATTGGGAGAGACCCACTGTTATGGGATGAGGCTGAGGAGTTTCGGCCAGAAAGGTTCTTGAATTCTTCTATAGATTTCACAGGGAAAGACTTTGAGTTGATCCCATTTGGAGCTGGCCGGAGAGGTTGCCCGGGAACTCTGTTCGCGGCAATGGCAATCGAGGTTGCGTTAGCAAATCTTGTTCATCAGTTTGATTGGGAAGTGGGGGGTGGAGGTAGAAGGGAGGACTTGGATATGACTGAATGCACTGGTCTGACCATTCATAGAAAAGTTCCACTTCTTGCAGACCTACTTTATGTAAGTATGTCATTACACGAGGAGGAGAAAAAAAAAAGAAGAAATCGTTTATAA 1584 46.53 MGSFLDLLYKENASFFLLFLPFFVFIYFLIKWLYPTTPAVTTKRLPPSPPKLPIIGNLHQLGLLPHRSLWALAQRHGPIMLLHFGKVPVVIVSAADAAREIMKTNDVIFLNRPKSSIFAKLLYDYKDVSMAPYGEYWRQMRSICVLHLLSNRRVQSFRGVREEETALLMEKISSSSSSSTPIDLSKMFLSLTNDLICRVALGRKYSGDETGRKYRELLKEFVGLLGGFDVADYIPWLSWVNFINGLDAKVEKVAKEFDRFLDEVVKEHVERRKRGVDEEVKDFVDVLLGIQEDNVTGVAITGVCIKALTLDMFAAGSDTTYTVLEWAMTELLRHPQVMRQLQNEVRGIAQGKLLITEDDLDKMQYLKAVIKETLRLHPPVPLLLPRESTRGAKIMGYDIEVGTQVITNAWAIGRDPLLWDEAEEFRPERFLNSSIDFTGKDFELIPFGAGRRGCPGTLFAAMAIEVALANLVHQFDWEVGGGGRREDLDMTECTGLTIHRKVPLLADLLYVSMSLHEEEKKKRRNRL* 528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 11284887 11287081 + Vvi17g856 Vvi17g856 779553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g856 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Vvi17g856 527 Gene3D Cytochrome P450 37 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g856 527 Pfam Cytochrome P450 46 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g856 527 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g856 527 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g856 527 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g856 527 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g856 527 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g856 527 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g856 527 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g856 527 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g856 527 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g856 527 PANTHER CYTOCHROME P450 71A8-LIKE 20 506 - -
Vvi17g856 527 SUPERFAMILY Cytochrome P450 46 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g856 527 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g856 527 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g856 527 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g856 527 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g856 527 PANTHER CYTOCHROME P450 71B11-RELATED 20 506 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g617 Vvi17g856 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g856 - - vvi:100246781 992.26