Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g88 ATGCTTGATCTGCGGGAGAAAGTCAGGGCTTTCGTCAACAACAGATGGCTGGTGTTTGTGTGTGCAATGTGGGTGCAGTCATGGGCCGGGATCGGGTACCTGTTTGGGAGCATTTCGCCGGTGATAAAGAGTGCAATGGGGTATAATCAAAGGCAGGTGGCTATGTTGGGTGTGGCCAAGGATTTGGGGGATAGTATTGGGTTCGTAGCAGGGAGTTTATGTGAGGTTTTGCCAATCTGGGGAATTATGCTCATTGGGGTGGTGCAGAACTTTGTTGGGTATGGTGTGGTTTGGCTTGTGGTGACTCAGAAACTGCCCAGTTTGCCTCTGTGGGTGCTGTGCCTTTGTATATTTGTTGGAACAAATGGTGAGACCTACTTCAATACAGGAGCTCTGGTTTCATGTGTGCAGAACTTCCCCAAAAACCGGGGTCCCGTTGTGGGCATACTGAAGGGCTTTGCTGGGTTGAGCGGCGCAATTATTACTCAGATATACACTATGATCAATGCCCCTAATGCAGCCGCACTTATTTTCATGGTTGCAATCGGGCCATCTATGGTAGTCATTGCTCTGATGTTTATAGTTAGACCTGTGGGAGGTCACAAACAACTTAGGCCCTCTGATAGTTCAAGCTTCTTATTTACCTTCAGTCTTTGCCTCATCCTGGCTGCTTATCTGCTGGGGGTCTTGCTGCTTGAGGATCTAGTTGGTTTGAGCCAAGCTCTAGTCACATTGCTCACTGTTCTTCTGATCGTTATAATATTGCTTCCAGTTGCAATTCCCATCATATTAGTCTTTTTCTCTGGACCAATAGCTCCATCAGAGGAGGCCTTTCTACCTGAGCCTCAGAAACAAGAGTCCGGCAAGTCTGAGCAGGATGGGGAAGAGGTCATTCTCAGTGAGGTCGAAGACGAGAAGCCGGTGGAAGTTGATTCACTTCCAGCATCCGAAAGGCATAAGCGAATAGCCCATTTGCAAGCCAAGCTCTTCCAAGCAGCTGCAGAAGGAGCTGTGAGGGTGAAGAGGAAACGAGGACCGCGCAGAGGAGAGGATTTTACCTTAATGCAGGCACTAATAAAGGCTGATTTTTGGCTCATCTTCGTATCCCTTCTACTAGCTGCTGGATCCGGCTTGACGATTATTGACAACATGGGCCAGATGTGTGAGTCTCTGGGGTACAGCGATACGAGCGTATTTGTCTCCATGATCAGCATTTGGAACTTCCTGGGACGGGTTGGGGGCGGCTACTTCTCTGAAAGTATTGTAAGAAACTTCGCCTTCCCAAGACCAGTGTCAATGGCAATGTTTCAAGTCCTCATGTCAGTTGGGCTGCTCTACTACGCCTTAGCCTGGCCTGGGGCGATATACGTCGTGAGCGTCCTAATAGGACTAGGCTACGGTGCCCACTGGGCAATTGTCCCTGCAGCAGCCTCAGAGCTCTTTGGTTTGAAAAGCTTCGGGGCATTATACAACTTCCTCACACTGTCAAGTTCTATTGGTACTCTCATATTCTCTGAGGTCATTGCCAGTGGCATATACGACCACTACGCAGAGAAACAAGCTGCCCTCAAGCAGCATAGCTTGGGAGCCATGGCTGGTCTGCCTCTTGGAAAAGATGAATCATTGAGTTGTGAAGGGTACATATGCTATTCCATCACTTGTGGCGTCATGTCAGGACTCTGCCTTGTTGCAGTTGTGCTGAGCTTGATTGTCGTTCATAGGACCAAAAGTGTTTATGCCAATCTCTATGGAAGATCTCAGGCATGA 1767 48.73 MLDLREKVRAFVNNRWLVFVCAMWVQSWAGIGYLFGSISPVIKSAMGYNQRQVAMLGVAKDLGDSIGFVAGSLCEVLPIWGIMLIGVVQNFVGYGVVWLVVTQKLPSLPLWVLCLCIFVGTNGETYFNTGALVSCVQNFPKNRGPVVGILKGFAGLSGAIITQIYTMINAPNAAALIFMVAIGPSMVVIALMFIVRPVGGHKQLRPSDSSSFLFTFSLCLILAAYLLGVLLLEDLVGLSQALVTLLTVLLIVIILLPVAIPIILVFFSGPIAPSEEAFLPEPQKQESGKSEQDGEEVILSEVEDEKPVEVDSLPASERHKRIAHLQAKLFQAAAEGAVRVKRKRGPRRGEDFTLMQALIKADFWLIFVSLLLAAGSGLTIIDNMGQMCESLGYSDTSVFVSMISIWNFLGRVGGGYFSESIVRNFAFPRPVSMAMFQVLMSVGLLYYALAWPGAIYVVSVLIGLGYGAHWAIVPAAASELFGLKSFGALYNFLTLSSSIGTLIFSEVIASGIYDHYAEKQAALKQHSLGAMAGLPLGKDESLSCEGYICYSITCGVMSGLCLVAVVLSLIVVHRTKSVYANLYGRSQA* 589
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 823667 827024 - Vvi17g88 Vvi17g88 778785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g88 588 Pfam Nodulin-like 15 262 IPR010658 -
Vvi17g88 588 SUPERFAMILY MFS general substrate transporter 205 578 IPR036259 -
Vvi17g88 588 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 587 - -
Vvi17g88 588 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 587 - -
Vvi17g88 588 CDD MFS_Mch1p_like 15 565 - -
Vvi17g88 588 Gene3D MFS general substrate transporter like domains 203 579 IPR036259 -
Vvi17g88 588 SUPERFAMILY MFS general substrate transporter 8 198 IPR036259 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g88 - - vvi:100247479 1087.02