Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g895 ATGTCTTATTTGCAGAAAGACAACATACAAAACCAACGGGAAAATGTTGTTCTTACTGTAGCAAATGCACAGTGTCGACTTGGCATACCTGTTGAAGCTAATCCAAAAATTGATGAAAAAGCTGTCACTGAAGTTTTCTTGAAGGTGCTGGATAACTACATCAAATGGTGCAAATACTTGCGGATACGTCTTGCATGGAATAGTATAGAAGCAATTAATAGGGACAGGAGACTTTTTCTGGTTTCATTGTACTTTCTCATATGGGGTGAAGCTGCAAATGTTCGTTTCCTTCCTGAATGCATATGCTATATATTCCACCATATGGCAAGAGAGTTAGATGCAATATTGGATCATGGTGAAGCTAATCATGCTGCCAGTTGTATAACTGCAGATGGTTCAGTTTCCTTCCTTGAGCAAATCATTTGTCCTATATATGAGACAATGGAAAAGGAAGCTGCTAGAAACAATAATGGGAAAGCTGCACATTCTGCATGGCGGAATTATGATGACTTCAATGAATTTTTCTGGTCCCCTGCTTGCTTGGAGCTGAGCTGGCCTATGAAGAGAGATTCATCATTTCTGTTAAAACCTAAAGGGCGGAAAAGGACTGGGAAAACCACTTTTGTTGAGCACAGAACATTTCTTCATTTATATAGGAGTTTTCATCGACTGTGGATATTTTTGGCTTTAATGTTCCAGGCTTTGACAATTATAGCCTTCAATCATGGAAATATTGACCTGGATACCTTTAAGACAATACTTAGCATTGGACCAACATTTGCAATCATGAACTTCGCAGAGAGCTGTTTAGATGTGCTGCTTATGTTTGGGGCTTATGCCACTGCAAGAGGCATGGCCATTTCAAGGCTAGTCATTAGGTTTTTCTGGTGTGGCTTTAGCTCTGTATTTGTGACGTATGTCTACCTGAAGCTTCTCCAGGAAAGAAAAAATCCAAACTCAGATTCATTCTATTTCCGGATTTATATTATTGTATTGGGTGTTTATGCTGCTTTGCGCCTAGTCCTTGCAATGTTACTTAAATTTCCGTCATGTCATGCACTCTCCGAAATGTCTGACCAGGCATTCTTTCGATTTTTCAAGTGGATTTATCAGGAGCGATACTATGTGGGCCGTGGTCTTTTTGAAAGTACAAGTGATTATTTCAGGTATGTGGTCTACTGGCTGGTGATATTTGCATGCAAATTTACATTTGCTTACTTCCTCCAGATTAGACCACTAGTCAAACCGACCAATATTATTGTGGACCTTCCATCTTTGACATACTCATGGCATGATTTGATCTCGAAGAACAATAATAATTTGTTGACATTAGCTAGCATATGGGCTCCTGTTATTGCTATCTATCTCATGGACATTCTTATATGGTACACTATCTTATCTGCAATTGTTGGTGGTGTTAAGGGTGCACGTGCTCGGTTAGGCGAGATACGTTCAATTGAAATGGTGCATAAACGTTTTGAAAGCTTTCCAGCAGCCTTTGTCAATAACCTTGTGTCTCCTATGATGAAAAGGATGCCTTTTAATACACAATCAGCTCAGCATGTCTTTGTTCAATGCATCTGTGATCTTCCTGTCATGCTCAGTCATGCTTTCCAAACATCAAGGGGCATGTTGTCAACAGTATGGTTAAATAAGAAGAGAAGTTGCACATTAGGATATGCCATTTTGAGCATTTACAATGCCATAAATTGGATCTTGATATTTGTTTTATCCATGCAGGTTTCTCAGGATATGAACAAGACACATGCAGCCATTTTTTCTCCATTTTGGAATGAGATCATTAAAAGCTTGCGTGAGGAAGATTATATTAGTAACCGGGAGATGGACTTGCTTTCTATTCCTAGCAACACAGGAAGTTTGAGATTAGTTCAATGGCCTTTGTTTCTTCTAAGCAGTAAGATCTTGTTGGCAATCGATTTAGCTCTGGACTGTAAAGATTCACAGGCAGATCTTTGGAGTAGAATACGTAGGGATGAATACATGGCATATGCGGTTCAGGAGTGTTACTACAGTGTTGAAAAAATTTTACATTCCCTGGTTGATGGTGAAGGAAGCCTTTGGGTTGAAAGGATCTTCCGGGAGATCAATAATAGCATATTGGAGGATTCACTTTTTACAATCTTAGATCCCCAGAAGCTTCCAATGGTATTACAAAGATTGACGGCATTGACTGGACTTCTGATTAGGAATGAAACTCCTGACCGTGCAATAGGTGCTGCAAAATCTGTGCGTGAAATATATGATGTTGTTACACATGACCTGCTGACATCCAATTTAAGGGAGCAGCTTGATACATGGAATATATTGGCAAGAGCTAGAAATGAGGGGCGTCTGTTTTCTAGGATAGAATGGCCTAAAGATCCTGAAATTAAGGAGCAGGTGAAGCGGTTGCACCTATTTCTCACTGTGAAAGATTCTGCAGCTAATATTCCAAAGAATCTAGAAGCACAGAGGCGGTTACAATTTTTTACAAATTCATTGTTTATGGATATGCCTTCAGCAAAGCCAGTTTGTGAAATGATGCCATTCAGTGTCTTCACCCCATACTACAGTGAGACTGTACTATATAGTTCAACCGATCTGCGGTCAGAAAATGAGGATGGGATATCTACTCTTTTCTATCTTCAGAAAATCTTTCCAGATGAATGGGAGAATTTCTTGGAACGCATTGGTCGGCTTGGGTCTAATGAGGATGCAGATCTTCAAGAAAGCTCTAGTGATTCGTTGGAGCTTCGGTTTTGGGCATCTTATCGAGGCCAGACTCTAGCTAGGACAGTGCGTGGTATGATGTATTATAGACGGGCTTTAATGCTACAAAGCTACTTGGAAAGTAGATCATTTGGAGTAGATGACAATAATTCTCTAGCCAACTTCCCCACAACTCAAGGATTTGAGCTGTCACGTGAAGCAAGGGCACAAGTAGATCTGAAGTTCACATATGTAGTATCGTGCCAAATTTATGGGCAACAGAAACAGAAGAAGGCTTCAGAGGCAGCTGATATTGCTCTTTTGTTGCAGAGGAATGAGGCACTTCGAGTTGCTTTCATACATGTTGAAGACAATGGTGCAACTGATGGAAAGACTACAAAAGAATACTATTCAAAGCTTGTGAAAGCTGATGGAAATGGGAAAGATCAGGAAGTATATTCCATCAAACTTCCTGGAGATCCAAAGCTTGGAGAAGGTAAGCCTGAAAACCAAAATCATGCTATAATCTTCACACGTGGGGAAGCTATTCAAACTATTGATATGAATCAGGATAACTACCTGGAGGAGGCAATGAAAATGAGAAATCTTCTTGAGGAATTTCGAGGGAATCATGGTCTTCGACCTCCAACTATTCTTGGTGTTAGAGAGCATGTTTTCACCGGAAGTGTCTCATCTTTAGCCTGGTTTATGTCAAATCAAGAAACTAGCTTTGTGACCTTGGGCCAACGAGTTTTGGCTAGTCCTCTCAAAGTTCGTATGCACTACGGGCATCCTGATGTGTTCGACCGAATTTTTCATATATCTCGAGGTGGCATCAGTAAAGCATCACGTGTAATTAATATTAGTGAAGATATATATGCAGGGTTCAATTCCACACTGAGGCAGGGTAATATTACACACCATGAGTACATTCAGGTTGGAAAGGGTAGAGATGTTGGGTTAAACCAGATTGCCCTATTTGAAGGAAAAGTGGCTGGTGGAAATGGAGAACAAGTATTAAGCAGGGACATCTACAGGCTTGGACAACTTTTTGATTTCTTTAGAATGCTTTCTTTCTTCTTTACTACCGTTGGATACTATGTCTGCACAATGATGACAGTTATTACGGTATATATTTTCTTATATGGAAGAGTTTACCTGGCTTTCTCTGGGCTTGATGAGGGAATTGAAAGGTTTGCTAAATTGACTGGTAACACGGCACTAAGTGCAGCTCTAAATGCTCAGTTCCTGGTCCAGATTGGAGTTTTTACTGCTGTGCCAATGGTAGTGGGTTTTATACTTGAATCGGGACTGCTGAAGGCTGTTTTCAGTTTTATCACAATGCAGCTTCAGTTATGTTCCGTCTTCTTCACATTCTCATTAGGAACTAGAACTCATTATTTTGGACGTACTATCCTCCATGGCGGTGCTAAATACAGAGCAACTGGTAGAGGCTTTGTTGTTCGTCACATCAAGTTTGCCGAAAATTACAGGCTGTACTCAAGAAGTCATTTTGTTAAGGCGCTTGAAGTGGCTCTGCTCCTAATAGTATACATCGCATATGGGCACACAGGAGGAGGCTCTGTGTCTTTTATTCTGTTAACTCTTAGCAGTTGGTTCCTTGTCATATCATGGCTCTTTGCTCCTTATATTTTTAATCCCTCAGGTTTTGAGTGGCAAAAGACTGTGGAGGACTTCGATGATTGGACCAGTTGGCTCCTATATAAAGGTGGAGTTGGGGTGAAGGGAGACCATAGCTGGGAATCTTGGTGGGAGGAAGAACAGGCGCATATCCAAACGCTAAGAGGCCGTATATTGGAAACAATTTTAAGCTTAAGGTTTATTATATTTCAATATGGCATTGTATACAAACTCCATCTCACACAAAAAGATACCTCACTTGCGATTTATGGGTTCTCCTGGGTTGTGCTGGTTGGCATTGTCATGATATTCAAGTTATTCAGCTTTAGCCCAAAAAAATCCAGCAACATCCAGCTAGTGATGCGATTTTCACAGGGAGTTTTTTCCTTAGGACTTGTTGCAGCTCTTTGCCTTGTTGTTGCCTTCACCGATCTGTCAATTGTAGACCTGTTTGCTAGCATCCTTGCATTTATTCCTACTGGATGGATGATTCTATCTTTAGCGATCACATGGAAAAGGGTGGTAAGGAGCCTAGGCTTATGGGATTCAGTCCGGGAGTTTGCTAGAATGTATGATGCTGGGATGGGTATGATCATTTTTGCCCCAATAGCAGTGCTATCATGGTTCCCATTTATTTCCACCTTCCAGTCTCGTCTTCTCTTTAACCAAGCATTCAGCCGTGGACTGGAGATCTCCATCATCCTTGCAGGAAACAAAGCTAATGTCCAGGCCTGA 5085 40.77 MSYLQKDNIQNQRENVVLTVANAQCRLGIPVEANPKIDEKAVTEVFLKVLDNYIKWCKYLRIRLAWNSIEAINRDRRLFLVSLYFLIWGEAANVRFLPECICYIFHHMARELDAILDHGEANHAASCITADGSVSFLEQIICPIYETMEKEAARNNNGKAAHSAWRNYDDFNEFFWSPACLELSWPMKRDSSFLLKPKGRKRTGKTTFVEHRTFLHLYRSFHRLWIFLALMFQALTIIAFNHGNIDLDTFKTILSIGPTFAIMNFAESCLDVLLMFGAYATARGMAISRLVIRFFWCGFSSVFVTYVYLKLLQERKNPNSDSFYFRIYIIVLGVYAALRLVLAMLLKFPSCHALSEMSDQAFFRFFKWIYQERYYVGRGLFESTSDYFRYVVYWLVIFACKFTFAYFLQIRPLVKPTNIIVDLPSLTYSWHDLISKNNNNLLTLASIWAPVIAIYLMDILIWYTILSAIVGGVKGARARLGEIRSIEMVHKRFESFPAAFVNNLVSPMMKRMPFNTQSAQHVFVQCICDLPVMLSHAFQTSRGMLSTVWLNKKRSCTLGYAILSIYNAINWILIFVLSMQVSQDMNKTHAAIFSPFWNEIIKSLREEDYISNREMDLLSIPSNTGSLRLVQWPLFLLSSKILLAIDLALDCKDSQADLWSRIRRDEYMAYAVQECYYSVEKILHSLVDGEGSLWVERIFREINNSILEDSLFTILDPQKLPMVLQRLTALTGLLIRNETPDRAIGAAKSVREIYDVVTHDLLTSNLREQLDTWNILARARNEGRLFSRIEWPKDPEIKEQVKRLHLFLTVKDSAANIPKNLEAQRRLQFFTNSLFMDMPSAKPVCEMMPFSVFTPYYSETVLYSSTDLRSENEDGISTLFYLQKIFPDEWENFLERIGRLGSNEDADLQESSSDSLELRFWASYRGQTLARTVRGMMYYRRALMLQSYLESRSFGVDDNNSLANFPTTQGFELSREARAQVDLKFTYVVSCQIYGQQKQKKASEAADIALLLQRNEALRVAFIHVEDNGATDGKTTKEYYSKLVKADGNGKDQEVYSIKLPGDPKLGEGKPENQNHAIIFTRGEAIQTIDMNQDNYLEEAMKMRNLLEEFRGNHGLRPPTILGVREHVFTGSVSSLAWFMSNQETSFVTLGQRVLASPLKVRMHYGHPDVFDRIFHISRGGISKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDIYRLGQLFDFFRMLSFFFTTVGYYVCTMMTVITVYIFLYGRVYLAFSGLDEGIERFAKLTGNTALSAALNAQFLVQIGVFTAVPMVVGFILESGLLKAVFSFITMQLQLCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVRHIKFAENYRLYSRSHFVKALEVALLLIVYIAYGHTGGGSVSFILLTLSSWFLVISWLFAPYIFNPSGFEWQKTVEDFDDWTSWLLYKGGVGVKGDHSWESWWEEEQAHIQTLRGRILETILSLRFIIFQYGIVYKLHLTQKDTSLAIYGFSWVVLVGIVMIFKLFSFSPKKSSNIQLVMRFSQGVFSLGLVAALCLVVAFTDLSIVDLFASILAFIPTGWMILSLAITWKRVVRSLGLWDSVREFARMYDAGMGMIIFAPIAVLSWFPFISTFQSRLLFNQAFSRGLEISIILAGNKANVQA* 1695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 12030875 12098518 - Vvi17g895 Vvi17g895 779592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g895 1694 Pfam 1,3-beta-glucan synthase component 817 1591 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Vvi17g895 1694 SMART FKS1_dom1_2 75 188 IPR026899 -
Vvi17g895 1694 PANTHER BNAC03G35120D PROTEIN 583 1692 - -
Vvi17g895 1694 PANTHER BNAC03G35120D PROTEIN 4 514 - -
Vvi17g895 1694 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 4 514 - -
Vvi17g895 1694 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 583 1692 - -
Vvi17g895 1694 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 77 185 IPR026899 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g895 K11000 - vvi:100255285 3170.18