Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g906 ATGGGAAGGGCTACAGAAATTGCATCTATTCTTCTCTTGATTTCTCTTTCCCTACAAGGAGCACTTCCAATTTCATCTCTCTCACACACTACCCAGGACTTTGAAGAATCTGCAGCTGCGAGAAATCTCAAACAACAAAAAGATCATGCCCATGAAGTACATTGTTCAAGAGAAAGAAGTAGGGCAGCTTGGAAGATTATTGAGGAGTATATGATGCCGTTTGTGGAGCGAGAGCAGTATCAGATATCAAGTTCATGTAAACTTCATCCTGACAATCACTTATTCAGTGATCAGGAGCAGCATAAGATTCATGTGGATATAAATGAATGGCGCTGTGGATACTGCAAGAAAAGCTTCCGTGCAGAGAAATTTCTTGATCAACATTTTGACAACAGACACTATGGTCTTCTGAATGTTAGTCATAGCAAGTGCTTGGCGGATTTATGTGGGGCGTTGCATTGTGACCTTGTAATGAATTCCAAGACGCCCAAAGCCAAGTGCAATCCTGCAGCTGCAGTGAGGAACCGTCACCTTTGTGAGTCTCTTGCTGATAGCTGTTTTCCTGTTAATCATGGTCTCTCAGCAAGCCGTCTTCATGACATTTTCTTGCGCCAATTCTGTGATGCTCATACTTGCTCAGGAGGAGGAAAACCTTTTTCCAGAGGGGGCATGAAGCAGCCAAGTATTTTCTACCTGGCTATTTCAATCTTGACTCTGATGATGCTTCCTGTGTTCTACGTTATTGTATATCTGTACCAGAGAGAAATGAGAAATGGAACCCAAGAGCTGAAGCGCATCTCACGACATGGGTTGAAAACAAAGCCGTCTTAG 831 43.08 MGRATEIASILLLISLSLQGALPISSLSHTTQDFEESAAARNLKQQKDHAHEVHCSRERSRAAWKIIEEYMMPFVEREQYQISSSCKLHPDNHLFSDQEQHKIHVDINEWRCGYCKKSFRAEKFLDQHFDNRHYGLLNVSHSKCLADLCGALHCDLVMNSKTPKAKCNPAAAVRNRHLCESLADSCFPVNHGLSASRLHDIFLRQFCDAHTCSGGGKPFSRGGMKQPSIFYLAISILTLMMLPVFYVIVYLYQREMRNGTQELKRISRHGLKTKPS* 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 12367009 12375117 + Vvi17g906 Vvi17g906 779603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g906 276 PANTHER ZINC FINGER PROTEIN-RELATED 8 276 - -
Vvi17g906 276 ProSitePatterns Zinc finger C2H2 type domain signature. 112 133 IPR013087 -
Vvi17g906 276 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 8 276 - -
Vvi17g906 276 ProSiteProfiles Zinc finger C2H2 type domain profile. 110 135 IPR013087 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g1237 Vvi17g906 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
14244 None None None None Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g906 - - vvi:100244377 568.155