Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17randomg11 ATGGTGATCAGTACCACCATCTCCGACTCCTCAGAGCATTTACACGCCACCTTCGCTTCCAGATATGTCAGAGATCCTCTACCAAAATTTAAGATGCCGGAGAGATCGATACCGAAGGAGGCGGCGTTTCAGATAATAAGCGATGAGCTGATGCTGGATGGTAACCCAAGACTGAACTTGGCGTCTTTCGTGACGACTTGGATGGAGGAGGAGTGTGATAAGCTGATCATGGCTTCCGTTAACAAGAACTATGTGGACATGGATGAGTATCCACTTGTTGGTCCACATCATAACCGGTGCGTGAACATGATAGCCCACCTCTTCAATGCTCCAGTGGGTGAGAATGAAACAGCAATTGGTGTGGGGACTGTGGGCTCATCGGAGGCGATCATGCTGGCAGGATTAGCTTTCAAAAGGAAGTGGCAGCAGAAGAGAAAATCAGAGGGCAAACCCTATGACAAACCCAACATTGTGACCGGAGCAAACGTCCAGGTTTGCTGGGAGAAGTTTGCAAGGTACTTTGAGGTTGAGCTGAAGGAGGTGAAGCTGAGAGAGGGGTACTATGTGATGGACCCTGTGAAAGCAGTAGAGATGGTGGATGAGAACACCATTTGTGTTGCAGCCATTCTGGGCTCAACACTCACCGGAGAGTTTGAGGATGTGAAGCTCCTGAACGAGCTTCTTACCAAAAAGAATACGGAAACAGGATGGGGCACCCCGATTCATGTTGATGCTGCCAGTGGAGGGTTCATAGCTCCATTCCTGCACCCGGATCTGGAATGGGATTTCCGTCTGCCACTAGTCAAGAGTATCAATGTGAGTGGTCACAAGTATGGCCTGGTGTATGCAGGTGTGGGGTGGGTGGTGTGGAGGACCAAAGATGACTTGCCAGAGGAGCTTATATTTCACATAAACTACCTGGGATCTGATCAACCTACTTTCACCCTCAACTTCTCCAAAGGTTCTAGCCAAATAATTGCTCAATATTATCAGTTTATAAGACTGGGGTTTGAGGGTTACAAGAACATCATGACAAACTGCATGGACAACGCAAATGTGCTGAAACAAGGACTAGTGGAGACAGGACGGTTTGAAATTGTCTCCAAGGATATTGGGGTGCCCCTGGTGGCCTTCTCTCTTAAAGACACAAGCAACTACACTGTGTTTGATATATCCAATAATCTGAGAAGGTATGGGTGGATCATTCCAGCATACACCATGCCACCCGATGCCGAACATATTGCTGTCCTGAGGGTGGTGGTAAGGGAGGACTTCAGCCGAAGCCTGGCAGAGAGACTGCTTTCAGACATTGAGAAAGTAATGAGGGAAATGGATGCAGTGCAGAGTCGGGCCACCACTAGAGCTACCCATTTGAATAAGAAGACTGTGATGGAGAATCGTGAGGAGATTGCCATGTATTGGAAGAGGGTAGTGGATAGGAAAAAGACCAGCGGAGTCTGCTAG 1464 48.29 MVISTTISDSSEHLHATFASRYVRDPLPKFKMPERSIPKEAAFQIISDELMLDGNPRLNLASFVTTWMEEECDKLIMASVNKNYVDMDEYPLVGPHHNRCVNMIAHLFNAPVGENETAIGVGTVGSSEAIMLAGLAFKRKWQQKRKSEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLREGYYVMDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLNELLTKKNTETGWGTPIHVDAASGGFIAPFLHPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPEELIFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMTNCMDNANVLKQGLVETGRFEIVSKDIGVPLVAFSLKDTSNYTVFDISNNLRRYGWIIPAYTMPPDAEHIAVLRVVVREDFSRSLAERLLSDIEKVMREMDAVQSRATTRATHLNKKTVMENREEIAMYWKRVVDRKKTSGVC* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17randomg11 487 Gene3D - 361 447 - -
Vvi17randomg11 487 Gene3D - 66 359 IPR015421 GO:0003824
Vvi17randomg11 487 PANTHER GLUTAMATE DECARBOXYLASE 1 487 - -
Vvi17randomg11 487 SUPERFAMILY PLP-dependent transferases 11 444 IPR015424 -
Vvi17randomg11 487 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Vvi17randomg11 487 Gene3D - 1 65 - -
Vvi17randomg11 487 Coils Coil 430 450 - -
Vvi17randomg11 487 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 17 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Vvi17randomg11 487 PANTHER GLUTAMATE DECARBOXYLASE 1 487 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17randomg11 K01580 - vvi:100265999 955.666