Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1028 ATGTTGGCCTTGCAGTTTGGCTATGCCGGATTTCATGTAGTCTCCAGAGCTGCCCTCAACATGGGCATAAGCAAACTCGTGTTTCCAGTTTATAGGAACATTATCGCTTTGCTTCTGCTAGCCCCCTTTGCTTATTTTTTAGAGAAGAAGGAGCGACCAGCACTCACTCTTTCTTTTGTCGTCCAGTTCTTCCTCCTCGCACTAGTTGGAATAACAGCAAACCAAGGATTCTACTTGTTGGGTTTGGACAATACGTCACCCACCTTTGCATCAGCGATACAAAACTCCGTCCCTGCCATTACCTTTCTCATGGCAGCCGTACTTCGCATAGAGCAAGTGCGATTGAATAGAAAGGACGGTCTTGCCAAGGTGCTCGGAACCATCCTCTGTGTTGCTGGAGCTTCGGTTATTACTTTATATAAGGGTCCGACCATATACAGCCCATCTACACGGCCAGACAACACACCCCCACTGTTTCTTTCACTAGGAGATGCAAAGGGCAAAAACTGGACTCTTGGCTGCGTCTATCTCATTGGCCATTGCTTGTCTTGGTCCGCTTGGCTCGTCTTGCAGGCCCCAGTTTTGAAGAAGTACCCGGCTCGCCTCTCTGTTACCTCTTATACCTGCTTCTTTGGCCTTATTCAGTTTTTGATTATAGCTCTTGTTATTGAGAGAAACTCTCAAGCATGGCTTATTCACTCTGGCGCAGAACTCTTCAGCGTCTTCTATGCGGGAGTGGTGGCATCAGGGATCGCATTCGCTGTGCAGATATGGTGCATTGACAGGGGTGGCCCGGTGTTCGTGGCGGTGTACCAACCTGTTCAGACTCTGGTTGTCGCCATTATGGCTTCCGTGGCTTTAGGCGAAGAGTTCTATTTGGGAGGGATCATTGGAGCAGTGTTGATCATATCAGGACTCTACTTCGTGCTCTGGGGCAAAAGCGAAGAGAAGAAGTTTGCCGCCAAGGAGAAGGTCGCGATCCCCTCCACAGCGGAGCACGGAAACGTCAGGACATCAAGCCACATCAAGTCCTCCCTTACTCAGCCACTTCTCCCTCCGTCAACCGAGAGTGTTTGA 1077 49.77 MLALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLAPFAYFLEKKERPALTLSFVVQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAAVLRIEQVRLNRKDGLAKVLGTILCVAGASVITLYKGPTIYSPSTRPDNTPPLFLSLGDAKGKNWTLGCVYLIGHCLSWSAWLVLQAPVLKKYPARLSVTSYTCFFGLIQFLIIALVIERNSQAWLIHSGAELFSVFYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASVALGEEFYLGGIIGAVLIISGLYFVLWGKSEEKKFAAKEKVAIPSTAEHGNVRTSSHIKSSLTQPLLPPSTESV* 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 11384186 11387193 - Vvi18g1028 Vvi18g1028 780731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1028 358 PANTHER WAT1-RELATED PROTEIN 1 329 IPR030184 GO:0016021|GO:0022857
Vvi18g1028 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 31 141 - -
Vvi18g1028 358 Pfam EamA-like transporter family 172 310 IPR000620 GO:0016020|GO:0016021
Vvi18g1028 358 Pfam EamA-like transporter family 6 138 IPR000620 GO:0016020|GO:0016021
Vvi18g1028 358 PANTHER WAT1-RELATED PROTEIN 1 329 - -
Vvi18g1028 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 213 314 - -
Vvi18g1028 358 MobiDBLite consensus disorder prediction 332 358 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi4g1060 Vvi18g1028 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1028 - - vvi:100266024 691.034