Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1033 ATGGATCTGCTGCGATCGGAGCCAATGCAATTGGTGCAACTCATCATCCCTGTCGAAGCTGCTTATCGTACGATCTCCTACCTCGGAGACCTTGGCCTCTTCCAATTCAAAGACCTGAATGCTGAAAAGAGCCCATTTCAGAGGACGTATGCTACTCAGATCAAAAGATGTGGAGAGATGGCACGTAAACTACGTTTTTTCAAGGAGCAAATGACAAAGGCTGGTTTGTCACCCTCAACAAGGTCTGTGGCAAGAGCTGATTTTAATTTGGATGACTTGGAGGTACAACTTGCAGAGTTTGAAGCAGAGCTGACAGAAATAAAAGCAAACAATGAAAAGTTACAGCGTGCTTATAGTGAGCTTGTAGAATATAAGCTTGTTCTGCAGAAGGCGGGTGAGTTTTTCTATTCAGCCCAAAACACAGCTGTAGCTTGGCAAAGAGAAGTTGAAGCACATCACATTGGTGAAGGATCCATTGACAGTCCTTTACTACTGGAGCAAGAAATATTGACAGATCCATCAAAGCAGGTTAAGCTAGGGTTTGTCAGTGGCCTTGTTCCAAGAGAGAAGTCAATGGCTTTTGAAAGGATCCTGTTCCGTGCAACAAGGGGTAACGTTTTCCTGAAACAAGCTCTGGTAGAAGATTGTGTCATTGATCCTGTTTTGGGGGAAAAGATTGAGAAAAATGTGTTTGTTATTTTCTTCTCTGGAGAAAGAGTGAAGAACAAAATTCTGAAAATATGTGATGCTTTTGGAGCAAATCGTTACCCGTTTATGGATGACCTTGGTAAACAATATCAGATGATCACAGAGGTATCCAGAAGACTTTTAGAGCTGAAGACTACTGTAGATGCTGGACTTCTTCACTGGAGCAATTTGTTGCAGACAATTGGCCATCAATTTGAGCAGTGGAACCATTTGGTGAAGAAGGAGAAATCCATTTACCACACCTTAAATATGCTCAGCATTGATGTGACAAAAAAGTGTCTGGTGGCAGAAGGGTGGTGTCCTGTTTTTGCAACAAATCAGATCCAAAATGCATTGAAGCAGGCAACCTTTGACAGCAACTCCCAACTTGGGGCCATATTTCAGGTTTTGCATACAAAGGAATCACCACCTACCTATTTTCGCACTAATAAATTCACTTTGCCTTTTCAAGAAATCGTGGATGCATATGGGGTGGCCAAGTATCAGGAAGTGAATCCTGGTGTATACGTGATTATTACATTCCCTTTCCTTTTTGCTGTAATGTTTGGTGATTGGGGCCATGGAATATGCTTATTACTTGCAACCTTATATTTCATTGTCAAGGAAAAGAAATTTTCTAGTCAGAAACTAGGAGACATCATGGAGATGACTTTTGGTGGGCGTTATGTGATTATGATGATGGCACTGTTCTCAATATACACAGGATTGATATATAATGAATTCTTTTCTGTCCCTTTTGAACTATTTGGGCCCTCTGCCTATGAATGTCCCGACCCTTCCTGCAGGGGTGCTTCTATAGTGGGCTTGATTAGGGTGCGCCCCACTTATCCATTTGGTGTGGATCCTAAGTGGCATGGTTCTCGCAGTGAGTTGCCATTTCTTAACTCGTTAAAGATGAAGATGTCAATCCTACTTGGAGTAGCCCAGATGAATCTTGGAATCATATTAGGCTATTTCAATGCGACATTCTTTGGAAATAACCTAAATATTTGGTACCAATTTGTTCCCCAGATGATATTTTTAAACAGCCTTTTTGGGTACCTTTCTCTCCTCATAATTGTGAAATGGTGCATGGGTTCACAAGCTGATCTATACCATGTAATGATATATATGTTCCTGAGTCCTACTGATGACCTAGGCGAGAATCAGCTTTTTGTTGGCCAGAAAATGCTACAGCTTGTATTGCTCCTACTGGCCCTTGTTTCCATACCTTGGATGCTGTTCCCCAAGCCTTTTCTTTTGAAGAAGCAACACCAGGAAAGGCACCAAGGTCGATCCTACACACTGCTTCACAGTATTGATGACTCTCCTGAATTGGAGCGACATCATGATTCTCTTGGGCATGTGGAGTTTGAGTTTAGTGAAGTTTTTGTACACCAACTTATTCATACCATAGAGTTTGTCCTTGGAGCAGTCTCTAATACAGCTTCATACTTACGTTTATGGGCCCTCAGCCTCGCCCATTCAGAGTTGTCTAGTGTATTCTATGAGAAGGTTCTGCTTCTTGCCTGGGGGTTCAACAATGTTGTTATCCTTACCATTGGCATAATTGTGTTCATTTTTGCAACTGTGGGGGTGCTGCTAGTAATGGAAACCTTAAGTGCATTCCTGCATGCCCTAAGGCTTCATTGGGTGGAGTTCCAGAACAAGTTCTATGAGGGAGACGGTTACAAGTTCTATCCATTTTCATTTGCATTACTCACTGACGAGGATGCATGA 2427 42.11 MDLLRSEPMQLVQLIIPVEAAYRTISYLGDLGLFQFKDLNAEKSPFQRTYATQIKRCGEMARKLRFFKEQMTKAGLSPSTRSVARADFNLDDLEVQLAEFEAELTEIKANNEKLQRAYSELVEYKLVLQKAGEFFYSAQNTAVAWQREVEAHHIGEGSIDSPLLLEQEILTDPSKQVKLGFVSGLVPREKSMAFERILFRATRGNVFLKQALVEDCVIDPVLGEKIEKNVFVIFFSGERVKNKILKICDAFGANRYPFMDDLGKQYQMITEVSRRLLELKTTVDAGLLHWSNLLQTIGHQFEQWNHLVKKEKSIYHTLNMLSIDVTKKCLVAEGWCPVFATNQIQNALKQATFDSNSQLGAIFQVLHTKESPPTYFRTNKFTLPFQEIVDAYGVAKYQEVNPGVYVIITFPFLFAVMFGDWGHGICLLLATLYFIVKEKKFSSQKLGDIMEMTFGGRYVIMMMALFSIYTGLIYNEFFSVPFELFGPSAYECPDPSCRGASIVGLIRVRPTYPFGVDPKWHGSRSELPFLNSLKMKMSILLGVAQMNLGIILGYFNATFFGNNLNIWYQFVPQMIFLNSLFGYLSLLIIVKWCMGSQADLYHVMIYMFLSPTDDLGENQLFVGQKMLQLVLLLLALVSIPWMLFPKPFLLKKQHQERHQGRSYTLLHSIDDSPELERHHDSLGHVEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLLAWGFNNVVILTIGIIVFIFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFYPFSFALLTDEDA* 809
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 11429215 11475051 - Vvi18g1033 Vvi18g1033 780736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1033 808 Coils Coil 83 124 - -
Vvi18g1033 808 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 1 807 - -
Vvi18g1033 808 PIRSF ATP6V0A1 1 808 IPR026028 GO:0000220|GO:0046961
Vvi18g1033 808 Pfam V-type ATPase 116kDa subunit family 27 800 IPR002490 GO:0033179|GO:0046961|GO:1902600
Vvi18g1033 808 PANTHER VACUOLAR PROTON ATPASES 1 807 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g14 Vvi18g1033 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1033 K02154 - vvi:100255659 1599.72