Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1070 ATGACAGTGTTGCTTTTTGTCATTCTAGCTTTTCCTCTCTTGCTCTTGTTTCTTCATCGAAAACACAGAAAAAATGGAGGACTACTCCACCTTCCACCGGGTCCTCCTGGGCTTCCCGTCATTGGGAACCTGCACCAGATGGATAACTCAGCCCCTCATCGCTACTTATGGCAACTCTCTAAACAATACGGACCCCTCATGTCCTTGCGCCTCGGCTTCATCCCCACCATAGTGGTTTCTTCCGCCAGAATAGCAAAGGAGGTCATGAAAACACATGATCTTAAATTTGCTAGTAGGCCTTCCTTGATTGGCCCTCGAAGGCTATCTTACAACTGCCTAGATTTGGCCTTTTCACCATACAACGATTATTGGAGAGAAATGAGAAAGATTTGTGTTCTTCATCTCTTCACCTTGAAAAGGGTTCAATCCTATACTCCTATTCGGGAATATGAGGTTTCGCAAATGATTGAAAAAATCTCCAAGTTGGCATCTGCTTCCAAACTTATCAACTTGAGCGAGACAGTGATGTTTCTCACAATCACCATAATCTGTAGGGTTTCTTTCGGCAAGAGGTACGAGGATGAAGGATGTGAAACAAGTAGATTTCATGGACTTCTAAATGATGCTCAGGCTATGTTGGGAAGCTTCTTTTTCTCGGATCATTTTCCTTTGATGGGTTGGCTCGATAAACTCACCGGCCTGACTGCTCGGCTCGAGAAAACTCTCAGGGATATGGATTTGTTCTACCAGGAAATTATCGAAGATCATCTGAAACCAGACAGAAAAAAACAAGAACAAGAGGACATCACTGACGTCTTAATTGAACTGCAGAAGGACAACTCGTTTGCCATTGATATCACTTGGGATCACATTAAAGGAGTGCTCATGAATATATTTGTAGGAGGAACAGATGCAGGCACAGCCACCGTGATTTGGGCGATGACAGCATTAATGAAGAATCCCAGAGTGATGAAGAAAGCCCAAGAAGAAGTGAGAAATACATTTGGAAAGAAGGGATTTATAGGGGAAGATGATGTTGAGAAGCTCCCTTATCTCAAGGCAGTAGTGAAGGAGACGATGAGGCTGCTTCCTGCAGCTCCATTGCTGCTTCCAAGAGAAACACTTCAGAAGTGCAGTATAGATGGGTATGAGATACCACCCAAAACCCTAACGATGAAGGCTATCATAGTGACATCTCCTTGCAATATAGCACTAACTCATAGCAGTGAAGATCTTCACACCATGACAGTGTTGCTTTTTGTCATTCTAGCTTTTCCTCTCTTGCTCTTGTTTCTTCATCGAAAACACAGAAAAAATGGAGGACTACTCCACCTTCCACCGGGTCCTCCTGGGCTTCCCTTCATTGGGAACCTGCACCAGATGGATAACTCAGCCCGTCATCGCTACTTATGGCAACTCTCTAAACAATACGGATCCCTCATGTCCTTGCGCCTCGGCTTCATCCCCACCATAGTGGTTTCTTCCGCCAGAATAGCAAAGGAGGTCATGAAAACACATGATCTTGAATTTGCTAGTAGGCCTTCCTTGATTGGCCCTCAAAGGCTATCTTACAACTGCCTAGATTTGGCCTTTTCACCATACAATGATTATTGGAGAGAAATGAGAAAGATTTGTGTTCTTCATCTCTTCACCTTGAAAAGGGTTCAATCCTATACTCCTATTCGGGAATATGAGGTTTCCCAAATGATTGAAAAAATATCCAAGTTGGCATCTGCTTCCAAACTTATCAACTTGAGCGAGACACTGATGTTTCTCACAAGCACCATAATCTGTAGGGTTGCTTTCGGCAAGAGGTACGAGGATGAAGGATTTGAAAGAAGTAGATTTCATGGACTTCTAAATGATGCTCAGGCTATGTTGGGAAGCTTCTTTTTCTCGGATCATTTTCCTTTGATAGGTTGGCTCGATAAACTCACCGGCCTGACTGCTCGGCTCGAGAAAACTTTCAGGGATATGGATTTGTTCTACCAGGAAATTATCGAAGATCATCTGAAACCAGACAGAAAAAAACAAGAACAAGAGGACATCACCGACGTCTTGATTGGACTGCAGAAGGACAACTCGTTTGCCATTGATATCACTTGGGATCACATTAAAGGAGTGCTCATGAATATATTTGTGGGAGGAACAGATACAGGCGCAGCCACCGTGATTTGGGCGATGACAGCATTAATGAAGAATCCCAGAGTGATGAAGAAAGCCCAAGAAGAAGTGAGAAATACATTTGGAAAGAAGGGATTTATAGGGGAAGATGATGTTGAGAAGCTTCCTTATCTCAAGGCAGTAGTGAAGGAGACGATGAGGCTGCTTCCTGCAGTTCCATTGCTAATTCCAAGAGAAACACTTCAGAAGTGCAGTATAGATGGGTATGAGATACCACCCAAAACCCTAGTATTTGTGAATGCGTGGGCCATTGGAAGAGATCCGGAGGCCTGGGAAAACCCAGAAGAGTTCATACCGGAGAGATTCTTGGGTTCTTCCGTGGACTTCAGAGGACAAAATTATAAGCTGATACCGTTCGGAGCAGGCCGAAGAGTTTGCCCAGGAATACATATCGGAGCTGTGACAGTGGAGCTCACACTAGCTAATCTTCTTTACTCATTTGACTGGGAAATGCCTGCTGGAATGAACAAGGAAGACATTGACTTTGATGTCATACCTGGTCTTACAATGCACAAGAAGAATGCTCTTTGCCTTATGGCTAAGAAATATAATTAA 2739 43.7 MTVLLFVILAFPLLLLFLHRKHRKNGGLLHLPPGPPGLPVIGNLHQMDNSAPHRYLWQLSKQYGPLMSLRLGFIPTIVVSSARIAKEVMKTHDLKFASRPSLIGPRRLSYNCLDLAFSPYNDYWREMRKICVLHLFTLKRVQSYTPIREYEVSQMIEKISKLASASKLINLSETVMFLTITIICRVSFGKRYEDEGCETSRFHGLLNDAQAMLGSFFFSDHFPLMGWLDKLTGLTARLEKTLRDMDLFYQEIIEDHLKPDRKKQEQEDITDVLIELQKDNSFAIDITWDHIKGVLMNIFVGGTDAGTATVIWAMTALMKNPRVMKKAQEEVRNTFGKKGFIGEDDVEKLPYLKAVVKETMRLLPAAPLLLPRETLQKCSIDGYEIPPKTLTMKAIIVTSPCNIALTHSSEDLHTMTVLLFVILAFPLLLLFLHRKHRKNGGLLHLPPGPPGLPFIGNLHQMDNSARHRYLWQLSKQYGSLMSLRLGFIPTIVVSSARIAKEVMKTHDLEFASRPSLIGPQRLSYNCLDLAFSPYNDYWREMRKICVLHLFTLKRVQSYTPIREYEVSQMIEKISKLASASKLINLSETLMFLTSTIICRVAFGKRYEDEGFERSRFHGLLNDAQAMLGSFFFSDHFPLIGWLDKLTGLTARLEKTFRDMDLFYQEIIEDHLKPDRKKQEQEDITDVLIGLQKDNSFAIDITWDHIKGVLMNIFVGGTDTGAATVIWAMTALMKNPRVMKKAQEEVRNTFGKKGFIGEDDVEKLPYLKAVVKETMRLLPAVPLLIPRETLQKCSIDGYEIPPKTLVFVNAWAIGRDPEAWENPEEFIPERFLGSSVDFRGQNYKLIPFGAGRRVCPGIHIGAVTVELTLANLLYSFDWEMPAGMNKEDIDFDVIPGLTMHKKNALCLMAKKYN* 913
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 11794592 11803508 - Vvi18g1070 Vvi18g1070 780773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1070 912 SUPERFAMILY Cytochrome P450 32 393 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1070 912 PANTHER CYTOCHROME P450 71B11-RELATED 8 391 - -
Vvi18g1070 912 PANTHER CYTOCHROME P450 71B11-RELATED 422 910 - -
Vvi18g1070 912 PANTHER CYTOCHROME P450 83B1 8 391 - -
Vvi18g1070 912 PANTHER CYTOCHROME P450 83B1 422 910 - -
Vvi18g1070 912 Pfam Cytochrome P450 446 904 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1070 912 Pfam Cytochrome P450 32 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1070 912 PRINTS E-class P450 group I signature 767 785 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1070 912 PRINTS E-class P450 group I signature 854 877 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1070 912 PRINTS E-class P450 group I signature 724 750 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1070 912 PRINTS E-class P450 group I signature 704 721 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1070 912 PRINTS E-class P450 group I signature 498 519 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1070 912 PRINTS E-class P450 group I signature 592 610 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1070 912 PRINTS E-class P450 group I signature 844 854 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1070 912 PRINTS E-class P450 group I signature 474 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1070 912 PRINTS E-class P450 group I signature 808 832 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1070 912 PRINTS P450 superfamily signature 768 779 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1070 912 PRINTS P450 superfamily signature 715 732 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1070 912 PRINTS P450 superfamily signature 845 854 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1070 912 SUPERFAMILY Cytochrome P450 446 908 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1070 912 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 847 856 IPR017972 GO:0005506|GO:0016705
Vvi18g1070 912 Gene3D Cytochrome P450 431 912 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1070 912 Gene3D Cytochrome P450 17 413 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1070 - - vvi:100245351 964.526