Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi18g1070 | ATGACAGTGTTGCTTTTTGTCATTCTAGCTTTTCCTCTCTTGCTCTTGTTTCTTCATCGAAAACACAGAAAAAATGGAGGACTACTCCACCTTCCACCGGGTCCTCCTGGGCTTCCCGTCATTGGGAACCTGCACCAGATGGATAACTCAGCCCCTCATCGCTACTTATGGCAACTCTCTAAACAATACGGACCCCTCATGTCCTTGCGCCTCGGCTTCATCCCCACCATAGTGGTTTCTTCCGCCAGAATAGCAAAGGAGGTCATGAAAACACATGATCTTAAATTTGCTAGTAGGCCTTCCTTGATTGGCCCTCGAAGGCTATCTTACAACTGCCTAGATTTGGCCTTTTCACCATACAACGATTATTGGAGAGAAATGAGAAAGATTTGTGTTCTTCATCTCTTCACCTTGAAAAGGGTTCAATCCTATACTCCTATTCGGGAATATGAGGTTTCGCAAATGATTGAAAAAATCTCCAAGTTGGCATCTGCTTCCAAACTTATCAACTTGAGCGAGACAGTGATGTTTCTCACAATCACCATAATCTGTAGGGTTTCTTTCGGCAAGAGGTACGAGGATGAAGGATGTGAAACAAGTAGATTTCATGGACTTCTAAATGATGCTCAGGCTATGTTGGGAAGCTTCTTTTTCTCGGATCATTTTCCTTTGATGGGTTGGCTCGATAAACTCACCGGCCTGACTGCTCGGCTCGAGAAAACTCTCAGGGATATGGATTTGTTCTACCAGGAAATTATCGAAGATCATCTGAAACCAGACAGAAAAAAACAAGAACAAGAGGACATCACTGACGTCTTAATTGAACTGCAGAAGGACAACTCGTTTGCCATTGATATCACTTGGGATCACATTAAAGGAGTGCTCATGAATATATTTGTAGGAGGAACAGATGCAGGCACAGCCACCGTGATTTGGGCGATGACAGCATTAATGAAGAATCCCAGAGTGATGAAGAAAGCCCAAGAAGAAGTGAGAAATACATTTGGAAAGAAGGGATTTATAGGGGAAGATGATGTTGAGAAGCTCCCTTATCTCAAGGCAGTAGTGAAGGAGACGATGAGGCTGCTTCCTGCAGCTCCATTGCTGCTTCCAAGAGAAACACTTCAGAAGTGCAGTATAGATGGGTATGAGATACCACCCAAAACCCTAACGATGAAGGCTATCATAGTGACATCTCCTTGCAATATAGCACTAACTCATAGCAGTGAAGATCTTCACACCATGACAGTGTTGCTTTTTGTCATTCTAGCTTTTCCTCTCTTGCTCTTGTTTCTTCATCGAAAACACAGAAAAAATGGAGGACTACTCCACCTTCCACCGGGTCCTCCTGGGCTTCCCTTCATTGGGAACCTGCACCAGATGGATAACTCAGCCCGTCATCGCTACTTATGGCAACTCTCTAAACAATACGGATCCCTCATGTCCTTGCGCCTCGGCTTCATCCCCACCATAGTGGTTTCTTCCGCCAGAATAGCAAAGGAGGTCATGAAAACACATGATCTTGAATTTGCTAGTAGGCCTTCCTTGATTGGCCCTCAAAGGCTATCTTACAACTGCCTAGATTTGGCCTTTTCACCATACAATGATTATTGGAGAGAAATGAGAAAGATTTGTGTTCTTCATCTCTTCACCTTGAAAAGGGTTCAATCCTATACTCCTATTCGGGAATATGAGGTTTCCCAAATGATTGAAAAAATATCCAAGTTGGCATCTGCTTCCAAACTTATCAACTTGAGCGAGACACTGATGTTTCTCACAAGCACCATAATCTGTAGGGTTGCTTTCGGCAAGAGGTACGAGGATGAAGGATTTGAAAGAAGTAGATTTCATGGACTTCTAAATGATGCTCAGGCTATGTTGGGAAGCTTCTTTTTCTCGGATCATTTTCCTTTGATAGGTTGGCTCGATAAACTCACCGGCCTGACTGCTCGGCTCGAGAAAACTTTCAGGGATATGGATTTGTTCTACCAGGAAATTATCGAAGATCATCTGAAACCAGACAGAAAAAAACAAGAACAAGAGGACATCACCGACGTCTTGATTGGACTGCAGAAGGACAACTCGTTTGCCATTGATATCACTTGGGATCACATTAAAGGAGTGCTCATGAATATATTTGTGGGAGGAACAGATACAGGCGCAGCCACCGTGATTTGGGCGATGACAGCATTAATGAAGAATCCCAGAGTGATGAAGAAAGCCCAAGAAGAAGTGAGAAATACATTTGGAAAGAAGGGATTTATAGGGGAAGATGATGTTGAGAAGCTTCCTTATCTCAAGGCAGTAGTGAAGGAGACGATGAGGCTGCTTCCTGCAGTTCCATTGCTAATTCCAAGAGAAACACTTCAGAAGTGCAGTATAGATGGGTATGAGATACCACCCAAAACCCTAGTATTTGTGAATGCGTGGGCCATTGGAAGAGATCCGGAGGCCTGGGAAAACCCAGAAGAGTTCATACCGGAGAGATTCTTGGGTTCTTCCGTGGACTTCAGAGGACAAAATTATAAGCTGATACCGTTCGGAGCAGGCCGAAGAGTTTGCCCAGGAATACATATCGGAGCTGTGACAGTGGAGCTCACACTAGCTAATCTTCTTTACTCATTTGACTGGGAAATGCCTGCTGGAATGAACAAGGAAGACATTGACTTTGATGTCATACCTGGTCTTACAATGCACAAGAAGAATGCTCTTTGCCTTATGGCTAAGAAATATAATTAA | 2739 | 43.7 | MTVLLFVILAFPLLLLFLHRKHRKNGGLLHLPPGPPGLPVIGNLHQMDNSAPHRYLWQLSKQYGPLMSLRLGFIPTIVVSSARIAKEVMKTHDLKFASRPSLIGPRRLSYNCLDLAFSPYNDYWREMRKICVLHLFTLKRVQSYTPIREYEVSQMIEKISKLASASKLINLSETVMFLTITIICRVSFGKRYEDEGCETSRFHGLLNDAQAMLGSFFFSDHFPLMGWLDKLTGLTARLEKTLRDMDLFYQEIIEDHLKPDRKKQEQEDITDVLIELQKDNSFAIDITWDHIKGVLMNIFVGGTDAGTATVIWAMTALMKNPRVMKKAQEEVRNTFGKKGFIGEDDVEKLPYLKAVVKETMRLLPAAPLLLPRETLQKCSIDGYEIPPKTLTMKAIIVTSPCNIALTHSSEDLHTMTVLLFVILAFPLLLLFLHRKHRKNGGLLHLPPGPPGLPFIGNLHQMDNSARHRYLWQLSKQYGSLMSLRLGFIPTIVVSSARIAKEVMKTHDLEFASRPSLIGPQRLSYNCLDLAFSPYNDYWREMRKICVLHLFTLKRVQSYTPIREYEVSQMIEKISKLASASKLINLSETLMFLTSTIICRVAFGKRYEDEGFERSRFHGLLNDAQAMLGSFFFSDHFPLIGWLDKLTGLTARLEKTFRDMDLFYQEIIEDHLKPDRKKQEQEDITDVLIGLQKDNSFAIDITWDHIKGVLMNIFVGGTDTGAATVIWAMTALMKNPRVMKKAQEEVRNTFGKKGFIGEDDVEKLPYLKAVVKETMRLLPAVPLLIPRETLQKCSIDGYEIPPKTLVFVNAWAIGRDPEAWENPEEFIPERFLGSSVDFRGQNYKLIPFGAGRRVCPGIHIGAVTVELTLANLLYSFDWEMPAGMNKEDIDFDVIPGLTMHKKNALCLMAKKYN* | 913 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 11794592 | 11803508 | - | Vvi18g1070 | Vvi18g1070 | 780773 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi18g1070 | 912 | SUPERFAMILY | Cytochrome P450 | 32 | 393 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g1070 | 912 | PANTHER | CYTOCHROME P450 71B11-RELATED | 8 | 391 | - | - | |
Vvi18g1070 | 912 | PANTHER | CYTOCHROME P450 71B11-RELATED | 422 | 910 | - | - | |
Vvi18g1070 | 912 | PANTHER | CYTOCHROME P450 83B1 | 8 | 391 | - | - | |
Vvi18g1070 | 912 | PANTHER | CYTOCHROME P450 83B1 | 422 | 910 | - | - | |
Vvi18g1070 | 912 | Pfam | Cytochrome P450 | 446 | 904 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g1070 | 912 | Pfam | Cytochrome P450 | 32 | 390 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g1070 | 912 | PRINTS | E-class P450 group I signature | 767 | 785 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g1070 | 912 | PRINTS | E-class P450 group I signature | 854 | 877 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g1070 | 912 | PRINTS | E-class P450 group I signature | 724 | 750 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g1070 | 912 | PRINTS | E-class P450 group I signature | 704 | 721 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g1070 | 912 | PRINTS | E-class P450 group I signature | 498 | 519 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g1070 | 912 | PRINTS | E-class P450 group I signature | 592 | 610 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g1070 | 912 | PRINTS | E-class P450 group I signature | 844 | 854 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g1070 | 912 | PRINTS | E-class P450 group I signature | 474 | 493 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g1070 | 912 | PRINTS | E-class P450 group I signature | 808 | 832 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g1070 | 912 | PRINTS | P450 superfamily signature | 768 | 779 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g1070 | 912 | PRINTS | P450 superfamily signature | 715 | 732 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g1070 | 912 | PRINTS | P450 superfamily signature | 845 | 854 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g1070 | 912 | SUPERFAMILY | Cytochrome P450 | 446 | 908 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g1070 | 912 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 847 | 856 | IPR017972 | GO:0005506|GO:0016705 | |
Vvi18g1070 | 912 | Gene3D | Cytochrome P450 | 431 | 912 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g1070 | 912 | Gene3D | Cytochrome P450 | 17 | 413 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi18g1070 | - | - | vvi:100245351 | 964.526 |